Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MTCO2P16-201ENST00000436962 677 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 AC122718.1-201ENST00000439448 744 ntBASIC3.41□□□□□ -1.86
SHC1P29353 UBE2V1P5-201ENST00000440070 405 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.41□□□□□ -1.86
SHC1P29353 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 TAF9P1-201ENST00000445421 515 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AL645939.1-201ENST00000453429 797 ntBASIC3.41□□□□□ -1.86
SHC1P29353 RFC5P1-201ENST00000454419 874 ntBASIC3.41□□□□□ -1.86
SHC1P29353 TAF9P2-201ENST00000454958 515 ntBASIC3.41□□□□□ -1.86
SHC1P29353 BX248409.1-201ENST00000455497 255 ntBASIC3.41□□□□□ -1.86
SHC1P29353 FAM133DP-201ENST00000464802 691 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC068305.1-201ENST00000497406 726 ntBASIC3.41□□□□□ -1.86
SHC1P29353 WBP1LP4-201ENST00000505043 344 ntBASIC3.41□□□□□ -1.86
SHC1P29353 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 MTATP6P22-201ENST00000507369 598 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC079395.1-201ENST00000510981 262 ntBASIC3.41□□□□□ -1.86
SHC1P29353 MTND5P13-201ENST00000513046 1079 ntBASIC3.41□□□□□ -1.86
SHC1P29353 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 SUMO2P20-201ENST00000520803 283 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.41□□□□□ -1.86
SHC1P29353 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.41□□□□□ -1.86
SHC1P29353 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.41□□□□□ -1.86
SHC1P29353 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.41□□□□□ -1.86
SHC1P29353 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.41□□□□□ -1.86
SHC1P29353 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.41□□□□□ -1.86
SHC1P29353 AC002400.1-201ENST00000569310 726 ntBASIC3.41□□□□□ -1.86
SHC1P29353 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
SHC1P29353 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.41□□□□□ -1.86
SHC1P29353 AP001981.2-201ENST00000603241 418 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC069545.1-201ENST00000605671 358 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.41□□□□□ -1.86
SHC1P29353 AC005344.1-201ENST00000613391 459 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC121761.2-201ENST00000617300 689 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC243756.2-201ENST00000618406 463 ntBASIC3.41□□□□□ -1.86
SHC1P29353 Z69908.1-201ENST00000622603 247 ntBASIC3.41□□□□□ -1.86
SHC1P29353 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.41□□□□□ -1.86
SHC1P29353 AC007494.3-201ENST00000624660 743 ntBASIC3.41□□□□□ -1.86
SHC1P29353 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHC1P29353 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.41□□□□□ -1.86
SHC1P29353 SGO1P1-201ENST00000603525 1447 ntBASIC3.41□□□□□ -1.86
SHC1P29353 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHC1P29353 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.41□□□□□ -1.86
SHC1P29353 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.4□□□□□ -1.86
SHC1P29353 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHC1P29353 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHC1P29353 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHC1P29353 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.86
SHC1P29353 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHC1P29353 AL391994.1-201ENST00000254724 282 ntBASIC3.4□□□□□ -1.87
SHC1P29353 RNA5SP124-201ENST00000362739 110 ntBASIC3.4□□□□□ -1.87
SHC1P29353 RNU6-619P-201ENST00000365146 108 ntBASIC3.4□□□□□ -1.87
SHC1P29353 RNU1-64P-201ENST00000365443 163 ntBASIC3.4□□□□□ -1.87
SHC1P29353 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHC1P29353 MIR217-201ENST00000384817 110 ntBASIC3.4□□□□□ -1.87
SHC1P29353 MIR134-201ENST00000385258 73 ntBASIC3.4□□□□□ -1.87
SHC1P29353 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHC1P29353 GSTA8P-201ENST00000404253 637 ntBASIC3.4□□□□□ -1.87
SHC1P29353 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 RPL36AP36-201ENST00000418616 301 ntBASIC3.4□□□□□ -1.87
SHC1P29353 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC019178.2-201ENST00000423595 505 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC002075.2-201ENST00000425207 252 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AL591419.1-201ENST00000427423 339 ntBASIC3.4□□□□□ -1.87
SHC1P29353 SEPT7P5-201ENST00000434048 306 ntBASIC3.4□□□□□ -1.87
SHC1P29353 USP9YP28-201ENST00000435142 589 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 USP9YP22-201ENST00000438971 294 ntBASIC3.4□□□□□ -1.87
SHC1P29353 MTCYBP34-201ENST00000439552 670 ntBASIC3.4□□□□□ -1.87
SHC1P29353 RPS7P5-201ENST00000441482 581 ntBASIC3.4□□□□□ -1.87
SHC1P29353 NANOGP10-201ENST00000453325 895 ntBASIC3.4□□□□□ -1.87
SHC1P29353 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.4□□□□□ -1.87
SHC1P29353 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 RPL21P71-201ENST00000465598 459 ntBASIC3.4□□□□□ -1.87
SHC1P29353 RN7SL132P-201ENST00000478131 296 ntBASIC3.4□□□□□ -1.87
SHC1P29353 RPL7P18-201ENST00000478965 734 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC087808.1-201ENST00000520501 361 ntBASIC3.4□□□□□ -1.87
SHC1P29353 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 AP001317.1-201ENST00000531194 960 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC005832.3-201ENST00000537929 631 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms