Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.56□□□□□ -2
COL8A2P25067 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL8A2P25067 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
COL8A2P25067 AC025125.1-201ENST00000624743 1922 ntBASIC2.56□□□□□ -2
COL8A2P25067 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.56□□□□□ -2
COL8A2P25067 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
COL8A2P25067 AC093831.2-201ENST00000624393 3427 ntBASIC2.55□□□□□ -2
COL8A2P25067 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.55□□□□□ -2
COL8A2P25067 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
COL8A2P25067 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.55□□□□□ -2
COL8A2P25067 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.55□□□□□ -2
COL8A2P25067 EEF1A1P41-201ENST00000414667 207 ntBASIC2.55□□□□□ -2
COL8A2P25067 RPL32P35-201ENST00000415214 394 ntBASIC2.55□□□□□ -2
COL8A2P25067 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.55□□□□□ -2
COL8A2P25067 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.55□□□□□ -2
COL8A2P25067 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.55□□□□□ -2
COL8A2P25067 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.55□□□□□ -2
COL8A2P25067 RN7SL75P-201ENST00000461926 281 ntBASIC2.55□□□□□ -2
COL8A2P25067 RPL21P103-201ENST00000479921 488 ntBASIC2.55□□□□□ -2
COL8A2P25067 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.55□□□□□ -2
COL8A2P25067 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 RNA5SP217-201ENST00000515959 91 ntBASIC2.55□□□□□ -2
COL8A2P25067 RNU1-103P-201ENST00000516502 125 ntBASIC2.55□□□□□ -2
COL8A2P25067 RN7SKP234-201ENST00000517173 224 ntBASIC2.55□□□□□ -2
COL8A2P25067 RPL12P22-201ENST00000519073 490 ntBASIC2.55□□□□□ -2
COL8A2P25067 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.55□□□□□ -2
COL8A2P25067 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.55□□□□□ -2
COL8A2P25067 AP004242.1-201ENST00000533701 349 ntBASIC2.55□□□□□ -2
COL8A2P25067 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.55□□□□□ -2
COL8A2P25067 AC092451.2-201ENST00000538746 658 ntBASIC2.55□□□□□ -2
COL8A2P25067 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.55□□□□□ -2
COL8A2P25067 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.55□□□□□ -2
COL8A2P25067 AC016877.3-201ENST00000606778 504 ntBASIC2.55□□□□□ -2
COL8A2P25067 AL163051.2-201ENST00000618976 735 ntBASIC2.55□□□□□ -2
COL8A2P25067 AC006065.5-201ENST00000623427 349 ntBASIC2.55□□□□□ -2
COL8A2P25067 AC048347.1-201ENST00000624621 427 ntBASIC2.55□□□□□ -2
COL8A2P25067 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL8A2P25067 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 AL079305.1-201ENST00000623159 3008 ntBASIC2.54□□□□□ -2
COL8A2P25067 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 RNU6-98P-201ENST00000384173 107 ntBASIC2.54□□□□□ -2
COL8A2P25067 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 MIR1303-201ENST00000408625 86 ntBASIC2.54□□□□□ -2
COL8A2P25067 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.54□□□□□ -2
COL8A2P25067 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.54□□□□□ -2
COL8A2P25067 AC012498.1-201ENST00000424037 437 ntBASIC2.54□□□□□ -2
COL8A2P25067 TRIAP1P1-201ENST00000427062 225 ntBASIC2.54□□□□□ -2
COL8A2P25067 UBE2V1P6-201ENST00000430840 422 ntBASIC2.54□□□□□ -2
COL8A2P25067 RPS12P18-201ENST00000442381 270 ntBASIC2.54□□□□□ -2
COL8A2P25067 RNFT1P2-201ENST00000443064 757 ntBASIC2.54□□□□□ -2
COL8A2P25067 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.54□□□□□ -2
COL8A2P25067 AC112492.1-201ENST00000449607 712 ntBASIC2.54□□□□□ -2
COL8A2P25067 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 RPL7P5-201ENST00000471472 736 ntBASIC2.54□□□□□ -2
COL8A2P25067 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 ST13P14-201ENST00000474095 734 ntBASIC2.54□□□□□ -2
COL8A2P25067 AC096576.1-201ENST00000489014 359 ntBASIC2.54□□□□□ -2
COL8A2P25067 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.54□□□□□ -2
COL8A2P25067 MTCO2P9-201ENST00000503214 694 ntBASIC2.54□□□□□ -2
COL8A2P25067 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.54□□□□□ -2
COL8A2P25067 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.54□□□□□ -2
COL8A2P25067 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.54□□□□□ -2
COL8A2P25067 AC005776.1-201ENST00000603164 290 ntBASIC2.54□□□□□ -2
COL8A2P25067 AL392112.1-201ENST00000605115 829 ntBASIC2.54□□□□□ -2
COL8A2P25067 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
COL8A2P25067 AC005014.3-201ENST00000605985 190 ntBASIC2.54□□□□□ -2
COL8A2P25067 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL8A2P25067 SCARNA15.3-201ENST00000626315 122 ntBASIC2.54□□□□□ -2
COL8A2P25067 SCARNA4.1-201ENST00000628597 123 ntBASIC2.54□□□□□ -2
COL8A2P25067 AC139713.2-210ENST00000641741 992 ntBASIC2.54□□□□□ -2
COL8A2P25067 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.54□□□□□ -2
COL8A2P25067 AC118273.1-201ENST00000525324 3006 ntBASIC2.53□□□□□ -2
COL8A2P25067 MAPK10-362ENST00000641864 4484 ntBASIC2.53□□□□□ -2
COL8A2P25067 AL049737.1-201ENST00000413920 1403 ntBASIC2.53□□□□□ -2
COL8A2P25067 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
COL8A2P25067 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.53□□□□□ -2
COL8A2P25067 RNU6-252P-201ENST00000363232 107 ntBASIC2.53□□□□□ -2
COL8A2P25067 U3.6-201ENST00000363622 211 ntBASIC2.53□□□□□ -2
COL8A2P25067 ATP5F1P6-201ENST00000402768 767 ntBASIC2.53□□□□□ -2
COL8A2P25067 HSPE1P26-201ENST00000405341 275 ntBASIC2.53□□□□□ -2
COL8A2P25067 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.53□□□□□ -2
COL8A2P25067 XKRYP4-201ENST00000414395 483 ntBASIC2.53□□□□□ -2
COL8A2P25067 UBE2D3P3-201ENST00000426992 425 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms