Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 RNU6-178P-201ENST00000384631 104 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 EI24P2-201ENST00000397776 1076 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 UBE2V1P6-201ENST00000430840 422 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 HSFY7P-201ENST00000432672 318 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 VDAC1P3-201ENST00000434069 851 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 HSFY8P-201ENST00000437934 318 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AP000949.1-201ENST00000438328 629 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 OR6C72P-201ENST00000451403 892 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 HSFY5P-201ENST00000453726 309 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 MTND3P3-201ENST00000505004 126 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 RN7SKP5-201ENST00000517045 272 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.63□□□□□ -1.99
COL5A1P20908 OR4R2P-201ENST00000530815 597 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.63□□□□□ -1.99
COL5A1P20908 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.63□□□□□ -1.99
COL5A1P20908 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.63□□□□□ -1.99
COL5A1P20908 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.63□□□□□ -1.99
COL5A1P20908 AC090079.2-201ENST00000575289 768 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC009163.5-201ENST00000575421 637 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 BNIP3P8-201ENST00000597863 560 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC016542.1-201ENST00000608259 493 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AL590410.1-201ENST00000617925 333 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 AC253576.2-201ENST00000618815 580 ntBASIC2.63□□□□□ -1.99
COL5A1P20908 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.63□□□□□ -1.99
COL5A1P20908 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL5A1P20908 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL5A1P20908 Y_RNA.226-201ENST00000364337 114 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL5A1P20908 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL5A1P20908 RNA5SP425-201ENST00000410336 112 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AC004987.3-201ENST00000413879 771 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 AC009963.1-201ENST00000417265 157 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.62□□□□□ -1.99
COL5A1P20908 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 MTND1P36-201ENST00000522384 936 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AP003122.3-201ENST00000526316 255 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AC243972.3-201ENST00000539655 198 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.62□□□□□ -1.99
COL5A1P20908 AC009268.1-201ENST00000561352 1203 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.62□□□□□ -1.99
COL5A1P20908 AC055876.1-202ENST00000567053 138 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 MTND4LP25-201ENST00000570218 163 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AC098483.2-201ENST00000603158 454 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AC024933.1-201ENST00000608472 348 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AP000240.1-201ENST00000609910 452 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 AL162233.1-201ENST00000620014 944 ntBASIC2.62□□□□□ -1.99
COL5A1P20908 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
COL5A1P20908 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL5A1P20908 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL5A1P20908 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
COL5A1P20908 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
COL5A1P20908 AC107021.2-201ENST00000567714 2095 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.61□□□□□ -1.99
COL5A1P20908 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.61□□□□□ -1.99
COL5A1P20908 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.61□□□□□ -1.99
COL5A1P20908 AL121882.1-201ENST00000422893 417 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 HMGN2P3-201ENST00000433603 273 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 HMGN2P5-201ENST00000436882 273 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 SNRPFP2-201ENST00000440710 251 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.61□□□□□ -1.99
COL5A1P20908 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 MTND2P39-201ENST00000457230 764 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 RNA5SP148-201ENST00000516527 94 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 TRAV37-201ENST00000553906 342 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AL389895.1-201ENST00000554127 252 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 AL671309.1-201ENST00000603750 544 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 AL392112.1-201ENST00000605115 829 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
COL5A1P20908 AC099063.3-201ENST00000642066 185 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 Z73965.1-201ENST00000623412 2297 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL5A1P20908 AC008264.2-201ENST00000610193 3731 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
COL5A1P20908 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.61□□□□□ -1.99
COL5A1P20908 SNORA70E-201ENST00000384492 135 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 RNU6-883P-201ENST00000384597 107 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 OR51A3P-201ENST00000413596 924 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.61□□□□□ -1.99
COL5A1P20908 AC013410.2-201ENST00000422627 201 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 RPL17P35-201ENST00000432217 549 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 MTCO3P43-201ENST00000440974 771 ntBASIC2.61□□□□□ -1.99
COL5A1P20908 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.61□□□□□ -1.99
COL5A1P20908 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms