Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.72□□□□□ -1.49
NFKB1P19838 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 RNU7-59P-201ENST00000459101 61 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 SNORD125-201ENST00000459538 96 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RPL21P93-201ENST00000480465 489 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RNU6-189P-201ENST00000516120 101 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 AC087854.1-201ENST00000519706 414 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.72□□□□□ -1.49
NFKB1P19838 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.72□□□□□ -1.49
NFKB1P19838 MIR4311-201ENST00000580794 100 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 AC018889.1-201ENST00000605372 397 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.72□□□□□ -1.49
NFKB1P19838 AC092608.2-201ENST00000624427 218 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.72□□□□□ -1.49
NFKB1P19838 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NFKB1P19838 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NFKB1P19838 MTND5P28-201ENST00000438005 1594 ntBASIC5.72□□□□□ -1.49
NFKB1P19838 SRRM1P3-201ENST00000426911 2678 ntBASIC5.71□□□□□ -1.49
NFKB1P19838 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NFKB1P19838 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
NFKB1P19838 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
NFKB1P19838 BDP1P-201ENST00000582658 1990 ntBASIC5.71□□□□□ -1.49
NFKB1P19838 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NFKB1P19838 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
NFKB1P19838 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NFKB1P19838 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 RNU6-99P-201ENST00000364721 107 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.71□□□□□ -1.5
NFKB1P19838 SNORA75.6-201ENST00000391318 127 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 RNF10P1-201ENST00000418589 369 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 RPS3P2-201ENST00000421346 701 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 AC234779.1-201ENST00000425910 285 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 MTND2P29-201ENST00000438595 412 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.71□□□□□ -1.5
NFKB1P19838 RPS24P6-201ENST00000452670 400 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 NXT1P1-201ENST00000458481 316 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 RNU6-1218P-201ENST00000458990 108 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 RNU6-615P-201ENST00000516065 106 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.71□□□□□ -1.5
NFKB1P19838 AC122688.1-201ENST00000541494 223 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 OR8R1P-201ENST00000543943 764 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 AL512605.2-201ENST00000592972 256 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AC104695.3-201ENST00000604052 296 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AL354984.3-201ENST00000604803 325 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 AC062037.2-201ENST00000610137 73 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AC107871.2-201ENST00000612894 502 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AL355480.1-201ENST00000629041 99 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.71□□□□□ -1.5
NFKB1P19838 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 CDC27P3-201ENST00000635418 1910 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 AC018809.2-201ENST00000602436 3823 ntBASIC5.71□□□□□ -1.5
NFKB1P19838 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NFKB1P19838 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NFKB1P19838 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NFKB1P19838 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NFKB1P19838 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.7□□□□□ -1.5
NFKB1P19838 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NFKB1P19838 AC144833.1-201ENST00000567953 4089 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NFKB1P19838 RNA5SP453-201ENST00000362503 119 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 RNU6-61P-201ENST00000365528 109 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 Y_RNA.489-201ENST00000384410 101 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 Y_RNA.496-201ENST00000384444 101 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 Y_RNA.576-201ENST00000384781 102 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 AC080125.1-201ENST00000414888 684 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 Z93019.1-201ENST00000416450 973 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms