Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.48□□□□□ -2.01
VCANP13611 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC2.48□□□□□ -2.01
VCANP13611 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.48□□□□□ -2.01
VCANP13611 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VCANP13611 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
VCANP13611 Z99496.1-201ENST00000469424 1477 ntBASIC2.48□□□□□ -2.01
VCANP13611 GTF2H2B-203ENST00000508065 1432 ntBASIC2.48□□□□□ -2.01
VCANP13611 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.48□□□□□ -2.01
VCANP13611 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VCANP13611 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.48□□□□□ -2.01
VCANP13611 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VCANP13611 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.48□□□□□ -2.01
VCANP13611 MTCO3P20-201ENST00000454926 688 ntBASIC2.48□□□□□ -2.01
VCANP13611 AC133473.1-201ENST00000455173 299 ntBASIC2.48□□□□□ -2.01
VCANP13611 RN7SL442P-201ENST00000473804 320 ntBASIC2.48□□□□□ -2.01
VCANP13611 AC090543.2-201ENST00000483963 348 ntBASIC2.48□□□□□ -2.01
VCANP13611 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.48□□□□□ -2.01
VCANP13611 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.48□□□□□ -2.01
VCANP13611 PVT1_3.1-201ENST00000620853 95 ntBASIC2.48□□□□□ -2.01
VCANP13611 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.47□□□□□ -2.01
VCANP13611 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VCANP13611 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
VCANP13611 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.47□□□□□ -2.01
VCANP13611 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.47□□□□□ -2.01
VCANP13611 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.47□□□□□ -2.01
VCANP13611 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
VCANP13611 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
VCANP13611 AP000526.1-201ENST00000603308 1388 ntBASIC2.47□□□□□ -2.01
VCANP13611 SKINT1L-201ENST00000401057 817 ntBASIC2.47□□□□□ -2.01
VCANP13611 AL731537.2-201ENST00000561565 951 ntBASIC2.47□□□□□ -2.01
VCANP13611 AC067747.1-201ENST00000608026 250 ntBASIC2.47□□□□□ -2.01
VCANP13611 AC022709.1-201ENST00000615967 87 ntBASIC2.47□□□□□ -2.01
VCANP13611 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.47□□□□□ -2.01
VCANP13611 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VCANP13611 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.47□□□□□ -2.01
VCANP13611 AP000275.1-201ENST00000411943 390 ntBASIC2.47□□□□□ -2.01
VCANP13611 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCANP13611 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCANP13611 ZNF603P-201ENST00000405613 487 ntBASIC2.46□□□□□ -2.02
VCANP13611 Z73417.1-201ENST00000447373 778 ntBASIC2.46□□□□□ -2.02
VCANP13611 AL163540.1-201ENST00000485382 386 ntBASIC2.46□□□□□ -2.02
VCANP13611 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.46□□□□□ -2.02
VCANP13611 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.46□□□□□ -2.02
VCANP13611 FABP5P12-201ENST00000515543 389 ntBASIC2.46□□□□□ -2.02
VCANP13611 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VCANP13611 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCANP13611 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VCANP13611 Z73965.1-201ENST00000623412 2297 ntBASIC2.46□□□□□ -2.02
VCANP13611 RNA5SP107-201ENST00000411358 122 ntBASIC2.46□□□□□ -2.02
VCANP13611 AP000936.3-201ENST00000438127 255 ntBASIC2.46□□□□□ -2.02
VCANP13611 AC009263.1-201ENST00000441193 1239 ntBASIC2.46□□□□□ -2.02
VCANP13611 AL592437.1-201ENST00000443781 492 ntBASIC2.46□□□□□ -2.02
VCANP13611 AC021146.1-201ENST00000511202 716 ntBASIC2.46□□□□□ -2.02
VCANP13611 AP005262.1-201ENST00000582646 997 ntBASIC2.46□□□□□ -2.02
VCANP13611 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VCANP13611 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCANP13611 SNORA67.3-201ENST00000384366 140 ntBASIC2.46□□□□□ -2.02
VCANP13611 VDAC1P3-201ENST00000434069 851 ntBASIC2.46□□□□□ -2.02
VCANP13611 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.46□□□□□ -2.02
VCANP13611 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.46□□□□□ -2.02
VCANP13611 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.46□□□□□ -2.02
VCANP13611 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCANP13611 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
VCANP13611 SNORA51.11-201ENST00000384442 131 ntBASIC2.45□□□□□ -2.02
VCANP13611 RNU2-68P-201ENST00000410878 191 ntBASIC2.45□□□□□ -2.02
VCANP13611 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.45□□□□□ -2.02
VCANP13611 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.45□□□□□ -2.02
VCANP13611 AC141257.3-201ENST00000572906 215 ntBASIC2.45□□□□□ -2.02
VCANP13611 AC090115.4-201ENST00000609970 188 ntBASIC2.45□□□□□ -2.02
VCANP13611 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCANP13611 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
VCANP13611 RNU6-342P-201ENST00000384521 104 ntBASIC2.45□□□□□ -2.02
VCANP13611 RNU2-17P-201ENST00000410290 190 ntBASIC2.45□□□□□ -2.02
VCANP13611 AC006960.1-201ENST00000419980 153 ntBASIC2.45□□□□□ -2.02
VCANP13611 PTP4A1P7-201ENST00000423476 514 ntBASIC2.45□□□□□ -2.02
VCANP13611 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.45□□□□□ -2.02
VCANP13611 FTH1P11-201ENST00000517577 551 ntBASIC2.45□□□□□ -2.02
VCANP13611 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.45□□□□□ -2.02
VCANP13611 AC135279.1-201ENST00000543493 504 ntBASIC2.45□□□□□ -2.02
VCANP13611 AP000919.1-202ENST00000581139 1264 ntBASIC2.45□□□□□ -2.02
VCANP13611 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.45□□□□□ -2.02
VCANP13611 MIR6504-201ENST00000613520 61 ntBASIC2.45□□□□□ -2.02
VCANP13611 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCANP13611 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VCANP13611 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VCANP13611 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.44□□□□□ -2.02
VCANP13611 FAM60DP-201ENST00000524174 632 ntBASIC2.44□□□□□ -2.02
VCANP13611 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.44□□□□□ -2.02
VCANP13611 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.44□□□□□ -2.02
VCANP13611 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.44□□□□□ -2.02
VCANP13611 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
VCANP13611 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VCANP13611 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VCANP13611 AL591704.1-201ENST00000432574 275 ntBASIC2.44□□□□□ -2.02
VCANP13611 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.44□□□□□ -2.02
VCANP13611 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.44□□□□□ -2.02
VCANP13611 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.44□□□□□ -2.02
VCANP13611 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VCANP13611 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VCANP13611 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms