Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-452P-201ENST00000384406 107 ntBASIC2.35□□□□□ -2.03
CTSDP07339 DNAJC19P6-201ENST00000401853 280 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.35□□□□□ -2.03
CTSDP07339 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.35□□□□□ -2.03
CTSDP07339 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
CTSDP07339 AL160175.1-201ENST00000428124 247 ntBASIC2.35□□□□□ -2.03
CTSDP07339 UBE2V1P1-201ENST00000430836 445 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC005189.1-201ENST00000431286 310 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.35□□□□□ -2.03
CTSDP07339 RPL23AP33-201ENST00000442301 452 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.35□□□□□ -2.03
CTSDP07339 ST13P20-201ENST00000447996 1065 ntBASIC2.35□□□□□ -2.03
CTSDP07339 RPL7P52-201ENST00000449200 742 ntBASIC2.35□□□□□ -2.03
CTSDP07339 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.35□□□□□ -2.03
CTSDP07339 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.35□□□□□ -2.03
CTSDP07339 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.35□□□□□ -2.03
CTSDP07339 RN7SL504P-201ENST00000494496 287 ntBASIC2.35□□□□□ -2.03
CTSDP07339 OR2A20P-203ENST00000498397 1268 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.35□□□□□ -2.03
CTSDP07339 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.35□□□□□ -2.03
CTSDP07339 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
CTSDP07339 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.35□□□□□ -2.03
CTSDP07339 AC023158.1-201ENST00000561632 1025 ntBASIC2.35□□□□□ -2.03
CTSDP07339 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
CTSDP07339 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.35□□□□□ -2.03
CTSDP07339 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC245128.3-201ENST00000594721 748 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC096577.2-201ENST00000611455 153 ntBASIC2.35□□□□□ -2.03
CTSDP07339 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CTSDP07339 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
CTSDP07339 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC022509.4-201ENST00000621404 572 ntBASIC2.35□□□□□ -2.03
CTSDP07339 AC026422.1-201ENST00000623961 452 ntBASIC2.35□□□□□ -2.03
CTSDP07339 MIR4496-201ENST00000635896 61 ntBASIC2.35□□□□□ -2.03
CTSDP07339 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CTSDP07339 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CTSDP07339 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 SNORA54-201ENST00000384281 123 ntBASIC2.34□□□□□ -2.03
CTSDP07339 AL139095.1-201ENST00000404326 391 ntBASIC2.34□□□□□ -2.03
CTSDP07339 AL355379.1-201ENST00000405542 640 ntBASIC2.34□□□□□ -2.03
CTSDP07339 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 MRPL50P2-201ENST00000416821 482 ntBASIC2.34□□□□□ -2.03
CTSDP07339 ATG3P1-201ENST00000419507 911 ntBASIC2.34□□□□□ -2.03
CTSDP07339 USP9YP36-201ENST00000424581 829 ntBASIC2.34□□□□□ -2.03
CTSDP07339 DUTP6-201ENST00000425573 462 ntBASIC2.34□□□□□ -2.03
CTSDP07339 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.34□□□□□ -2.03
CTSDP07339 CKS1BP5-201ENST00000434172 273 ntBASIC2.34□□□□□ -2.03
CTSDP07339 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.34□□□□□ -2.03
CTSDP07339 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.34□□□□□ -2.03
CTSDP07339 RPL34P26-201ENST00000445636 354 ntBASIC2.34□□□□□ -2.03
CTSDP07339 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.34□□□□□ -2.03
CTSDP07339 RPL27AP5-201ENST00000469428 449 ntBASIC2.34□□□□□ -2.03
CTSDP07339 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.34□□□□□ -2.03
CTSDP07339 RPL23AP55-201ENST00000498163 452 ntBASIC2.34□□□□□ -2.03
CTSDP07339 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.34□□□□□ -2.03
CTSDP07339 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.34□□□□□ -2.03
CTSDP07339 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.34□□□□□ -2.03
CTSDP07339 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.34□□□□□ -2.03
CTSDP07339 AC004486.1-201ENST00000546846 233 ntBASIC2.34□□□□□ -2.03
CTSDP07339 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.34□□□□□ -2.03
CTSDP07339 AADACP1-206ENST00000561502 1193 ntBASIC2.34□□□□□ -2.03
CTSDP07339 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.34□□□□□ -2.03
CTSDP07339 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.34□□□□□ -2.03
CTSDP07339 DUXAP4-201ENST00000603046 613 ntBASIC2.34□□□□□ -2.03
CTSDP07339 U6.48-201ENST00000618523 106 ntBASIC2.34□□□□□ -2.03
CTSDP07339 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CTSDP07339 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.34□□□□□ -2.04
CTSDP07339 AC009501.3-201ENST00000605001 1352 ntBASIC2.34□□□□□ -2.04
CTSDP07339 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
CTSDP07339 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CTSDP07339 AC096644.4-201ENST00000563417 2912 ntBASIC2.33□□□□□ -2.04
CTSDP07339 SNORA71.1-201ENST00000364523 117 ntBASIC2.33□□□□□ -2.04
CTSDP07339 RNU6-891P-201ENST00000384280 111 ntBASIC2.33□□□□□ -2.04
CTSDP07339 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CTSDP07339 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CTSDP07339 KRR1P1-201ENST00000419430 803 ntBASIC2.33□□□□□ -2.04
CTSDP07339 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.33□□□□□ -2.04
CTSDP07339 AL513175.2-201ENST00000422071 443 ntBASIC2.33□□□□□ -2.04
CTSDP07339 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.33□□□□□ -2.04
CTSDP07339 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.33□□□□□ -2.04
CTSDP07339 AP000705.1-201ENST00000454567 350 ntBASIC2.33□□□□□ -2.04
CTSDP07339 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.33□□□□□ -2.04
CTSDP07339 AC090525.1-201ENST00000479116 478 ntBASIC2.33□□□□□ -2.04
CTSDP07339 RPS3AP43-201ENST00000479743 781 ntBASIC2.33□□□□□ -2.04
CTSDP07339 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CTSDP07339 CAB39P1-201ENST00000502277 460 ntBASIC2.33□□□□□ -2.04
CTSDP07339 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.33□□□□□ -2.04
CTSDP07339 AC026412.2-201ENST00000512270 1075 ntBASIC2.33□□□□□ -2.04
CTSDP07339 MTND5P4-201ENST00000514978 288 ntBASIC2.33□□□□□ -2.04
CTSDP07339 RN7SKP277-201ENST00000516895 283 ntBASIC2.33□□□□□ -2.04
CTSDP07339 RNU6-711P-201ENST00000517255 106 ntBASIC2.33□□□□□ -2.04
CTSDP07339 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.33□□□□□ -2.04
CTSDP07339 AL121594.4-201ENST00000556211 1196 ntBASIC2.33□□□□□ -2.04
CTSDP07339 MIR5004-201ENST00000579078 107 ntBASIC2.33□□□□□ -2.04
CTSDP07339 ZNF861P-201ENST00000588126 639 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms