Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MTCO3P1-205ENST00000422088 832 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.74□□□□□ -1.65
COL3A1P02461 PNRC2P1-201ENST00000423940 420 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AC241584.1-201ENST00000438469 1241 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 ELOCP10-201ENST00000440624 327 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 SNRPEP8-201ENST00000442866 260 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.74□□□□□ -1.65
COL3A1P02461 PDSS1P2-201ENST00000449397 678 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 GTF2IP12-201ENST00000456547 356 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.74□□□□□ -1.65
COL3A1P02461 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.74□□□□□ -1.65
COL3A1P02461 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.74□□□□□ -1.65
COL3A1P02461 AP003392.2-201ENST00000527269 208 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AC103843.2-201ENST00000530523 682 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.74□□□□□ -1.65
COL3A1P02461 AP000619.3-201ENST00000535634 1127 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.74□□□□□ -1.65
COL3A1P02461 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.74□□□□□ -1.65
COL3A1P02461 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.74□□□□□ -1.65
COL3A1P02461 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AC233280.2-201ENST00000603917 1070 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 ELOCP34-201ENST00000604436 327 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AC063943.3-201ENST00000615562 356 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AC126177.8-201ENST00000618339 1015 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 U4.6-201ENST00000621618 127 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 AC099654.5-201ENST00000636479 350 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 LINC02471-203ENST00000641941 4752 ntBASIC4.74□□□□□ -1.65
COL3A1P02461 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL3A1P02461 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL3A1P02461 NCAPGP1-201ENST00000505112 1814 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 Y_RNA.359-201ENST00000365498 102 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 RNU6-1011P-201ENST00000384668 107 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 MIR7-3-201ENST00000384898 110 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 BTF3P7-201ENST00000407097 488 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 AC004552.1-201ENST00000419089 348 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 ISCA1P1-201ENST00000426679 387 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.73□□□□□ -1.65
COL3A1P02461 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 RPS26P3-201ENST00000470205 348 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AC090543.2-201ENST00000483963 348 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AC004057.1-201ENST00000485827 348 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AC112198.1-201ENST00000505369 1220 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 HMGB3P13-201ENST00000511263 607 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.73□□□□□ -1.65
COL3A1P02461 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.73□□□□□ -1.65
COL3A1P02461 OR5AP1P-201ENST00000529730 940 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.73□□□□□ -1.65
COL3A1P02461 AP001317.1-201ENST00000531194 960 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.73□□□□□ -1.65
COL3A1P02461 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL3A1P02461 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 AC092325.1-201ENST00000566449 554 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.73□□□□□ -1.65
COL3A1P02461 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.73□□□□□ -1.65
COL3A1P02461 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.73□□□□□ -1.65
COL3A1P02461 AL133370.2-201ENST00000619934 439 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AC092794.2-201ENST00000620933 563 ntBASIC4.73□□□□□ -1.65
COL3A1P02461 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COL3A1P02461 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL3A1P02461 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL3A1P02461 OR10AB1P-202ENST00000641219 1686 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL3A1P02461 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
COL3A1P02461 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.72□□□□□ -1.65
COL3A1P02461 RNU6-1331P-201ENST00000363658 106 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 MIR491-201ENST00000384877 84 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.72□□□□□ -1.65
COL3A1P02461 RWDD4P2-201ENST00000426392 563 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 RAC1P8-201ENST00000427086 527 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.72□□□□□ -1.65
COL3A1P02461 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.72□□□□□ -1.65
COL3A1P02461 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.72□□□□□ -1.65
COL3A1P02461 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.72□□□□□ -1.65
COL3A1P02461 EPS15P1-201ENST00000448836 336 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 OR51B8P-201ENST00000449892 769 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.72□□□□□ -1.65
COL3A1P02461 AC107015.1-201ENST00000466902 747 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 RPL7P49-201ENST00000471402 708 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.72□□□□□ -1.65
COL3A1P02461 RPL21P13-201ENST00000488305 481 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 FTH1P24-201ENST00000503502 462 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 RPL37P25-201ENST00000507308 276 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.72□□□□□ -1.65
COL3A1P02461 AC110768.1-201ENST00000509222 400 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 FABP5P5-201ENST00000515537 406 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 MTCYBP19-201ENST00000517463 1124 ntBASIC4.72□□□□□ -1.65
COL3A1P02461 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms