Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC018529.3-201ENST00000624212 2254 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL2A1P02458 RNU6-1005P-201ENST00000384519 107 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AL138885.1-201ENST00000405921 675 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 ATF1P1-201ENST00000406040 927 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.78□□□□□ -1.8
COL2A1P02458 MTCO3P30-201ENST00000426425 670 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 ETF1P3-201ENST00000430422 1160 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AC005345.1-201ENST00000431868 217 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AL353706.1-201ENST00000436728 494 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.78□□□□□ -1.8
COL2A1P02458 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 RPL12P26-201ENST00000452430 487 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.78□□□□□ -1.8
COL2A1P02458 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 AC113430.1-201ENST00000506872 718 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 AC108157.1-201ENST00000510511 539 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.78□□□□□ -1.8
COL2A1P02458 SNORA3.4-201ENST00000515969 96 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 RNA5SP356-201ENST00000515972 94 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 MTND1P5-201ENST00000517906 940 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.78□□□□□ -1.8
COL2A1P02458 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.78□□□□□ -1.8
COL2A1P02458 AC022880.1-201ENST00000534017 973 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.78□□□□□ -1.8
COL2A1P02458 NBR2-204ENST00000587322 63 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 AC107304.1-201ENST00000604229 296 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 uc_338.1-201ENST00000612113 180 ntBASIC3.78□□□□□ -1.8
COL2A1P02458 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.78□□□□□ -1.8
COL2A1P02458 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
COL2A1P02458 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL2A1P02458 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COL2A1P02458 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL2A1P02458 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.77□□□□□ -1.81
COL2A1P02458 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL2A1P02458 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.77□□□□□ -1.81
COL2A1P02458 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
COL2A1P02458 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.77□□□□□ -1.81
COL2A1P02458 AP002784.2-201ENST00000397300 549 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 Y_RNA.604-201ENST00000410574 102 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.77□□□□□ -1.81
COL2A1P02458 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.77□□□□□ -1.81
COL2A1P02458 FTLP19-201ENST00000433300 394 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.77□□□□□ -1.81
COL2A1P02458 MTCYBP3-201ENST00000445588 1137 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL2A1P02458 NPM1P49-201ENST00000448027 714 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.77□□□□□ -1.81
COL2A1P02458 RPL31P50-201ENST00000471002 296 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.77□□□□□ -1.81
COL2A1P02458 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.77□□□□□ -1.81
COL2A1P02458 MTND5P13-201ENST00000513046 1079 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 RFPL4AP5-201ENST00000514977 504 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL2A1P02458 MTND4P33-201ENST00000556706 766 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.77□□□□□ -1.81
COL2A1P02458 AC124856.1-201ENST00000600819 896 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.77□□□□□ -1.81
COL2A1P02458 IGHV3-29-201ENST00000604817 344 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AL583856.2-201ENST00000606298 543 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.77□□□□□ -1.81
COL2A1P02458 AC131159.1-201ENST00000621854 213 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.77□□□□□ -1.81
COL2A1P02458 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.77□□□□□ -1.81
COL2A1P02458 AC132825.8-201ENST00000640783 297 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL2A1P02458 OR5BR1P-201ENST00000524992 1330 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 HSPA8P17-201ENST00000427029 1382 ntBASIC3.77□□□□□ -1.81
COL2A1P02458 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL2A1P02458 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COL2A1P02458 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.76□□□□□ -1.81
COL2A1P02458 AF117829.1-206ENST00000621883 3802 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.76□□□□□ -1.81
COL2A1P02458 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.76□□□□□ -1.81
COL2A1P02458 RPL5P19-201ENST00000404228 893 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 AL606495.1-201ENST00000422100 813 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 AL445567.1-201ENST00000439121 144 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 MTND4P18-201ENST00000447010 465 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 RPS27AP8-201ENST00000452665 445 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 RNU7-125P-201ENST00000458760 62 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 Y_RNA.638-201ENST00000459374 113 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 SCARNA20.6-201ENST00000517251 106 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 NRON-201ENST00000517270 370 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.76□□□□□ -1.81
COL2A1P02458 MTCYBP20-201ENST00000524239 1129 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.76□□□□□ -1.81
COL2A1P02458 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.76□□□□□ -1.81
COL2A1P02458 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.76□□□□□ -1.81
COL2A1P02458 VN1R81P-201ENST00000602085 372 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.76□□□□□ -1.81
COL2A1P02458 PART1_2.1-201ENST00000612397 250 ntBASIC3.76□□□□□ -1.81
COL2A1P02458 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.76□□□□□ -1.81
COL2A1P02458 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL2A1P02458 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
COL2A1P02458 AL121895.2-201ENST00000619558 447 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms