Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC018755.4-201ENST00000619715 454 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC079597.1-201ENST00000624306 508 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 AC010149.2-201ENST00000637608 315 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 OR5BE1P-202ENST00000641168 1176 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 AC131971.1-201ENST00000332881 1482 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 AC095050.2-201ENST00000510748 1458 ntBASIC4.48□□□□□ -1.69
PHGDHO43175 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PHGDHO43175 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.48□□□□□ -1.69
PHGDHO43175 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHGDHO43175 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.48□□□□□ -1.69
PHGDHO43175 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 FAM91A3P-201ENST00000456826 2544 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.47□□□□□ -1.69
PHGDHO43175 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHGDHO43175 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PHGDHO43175 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHGDHO43175 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PHGDHO43175 FRG1BP-201ENST00000278882 761 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 SNORA71.2-201ENST00000364941 134 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 MIR124-3-201ENST00000384866 87 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 U3.20-201ENST00000390909 217 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 RN7SKP235-201ENST00000410662 305 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AF274854.1-201ENST00000413236 615 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC092447.6-201ENST00000414578 210 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 RPS12P10-201ENST00000427031 377 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC104837.2-201ENST00000427236 424 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC104651.1-201ENST00000427559 735 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 MRPS18BP2-201ENST00000434310 759 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHGDHO43175 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.47□□□□□ -1.69
PHGDHO43175 AC073614.1-201ENST00000438690 650 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 RPL23AP93-201ENST00000440847 484 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 MTND6P13-201ENST00000443510 523 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 AC104308.1-201ENST00000454621 333 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.47□□□□□ -1.69
PHGDHO43175 AC091685.2-201ENST00000454924 864 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.47□□□□□ -1.69
PHGDHO43175 snoU13.3-201ENST00000459441 104 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 RPS3AP41-201ENST00000462701 778 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 HMGB1P25-201ENST00000468402 607 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 RPL32P9-201ENST00000487963 407 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC096751.1-202ENST00000502691 1067 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC138853.1-201ENST00000503549 823 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.47□□□□□ -1.69
PHGDHO43175 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.47□□□□□ -1.69
PHGDHO43175 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 SNORA18.6-201ENST00000516792 115 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 RNU6-201P-201ENST00000517100 61 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC008694.2-201ENST00000517591 306 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 SETP7-201ENST00000552169 453 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 PCNPP1-201ENST00000552501 511 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC009063.1-201ENST00000563342 702 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC007599.1-201ENST00000568688 1174 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.47□□□□□ -1.69
PHGDHO43175 MIR3913-1-201ENST00000577744 102 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC060771.1-201ENST00000582031 164 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AL160290.3-201ENST00000604869 165 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC090578.1-201ENST00000604955 591 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AL365503.1-201ENST00000605247 905 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC055876.5-201ENST00000605667 259 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 AC103710.1-201ENST00000610003 901 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 BX323046.1-201ENST00000610145 535 ntBASIC4.47□□□□□ -1.69
PHGDHO43175 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.47□□□□□ -1.69
PHGDHO43175 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.47□□□□□ -1.69
PHGDHO43175 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.47□□□□□ -1.69
PHGDHO43175 MTND5P3-201ENST00000438536 1800 ntBASIC4.46□□□□□ -1.69
PHGDHO43175 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.46□□□□□ -1.69
PHGDHO43175 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
PHGDHO43175 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PHGDHO43175 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHGDHO43175 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.46□□□□□ -1.7
PHGDHO43175 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.46□□□□□ -1.7
PHGDHO43175 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHGDHO43175 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHGDHO43175 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
PHGDHO43175 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.46□□□□□ -1.7
PHGDHO43175 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
PHGDHO43175 LINC00622-201ENST00000562811 1570 ntBASIC4.46□□□□□ -1.7
PHGDHO43175 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PHGDHO43175 RNU6-1215P-201ENST00000384441 102 ntBASIC4.46□□□□□ -1.7
PHGDHO43175 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
PHGDHO43175 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PHGDHO43175 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PHGDHO43175 RNU6-837P-201ENST00000391056 108 ntBASIC4.46□□□□□ -1.7
PHGDHO43175 RN7SKP33-201ENST00000410942 340 ntBASIC4.46□□□□□ -1.7
PHGDHO43175 AC078974.1-201ENST00000411597 223 ntBASIC4.46□□□□□ -1.7
PHGDHO43175 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms