Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM38O00635 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 ZNF519P3-201ENST00000557158 1032 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM38O00635 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 MTND6P33-201ENST00000571794 183 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AC136618.2-201ENST00000575091 400 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 MIR3160-1-201ENST00000577972 85 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC079089.3-201ENST00000603094 673 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM38O00635 AC090948.1-201ENST00000607464 549 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AC009237.17-201ENST00000618111 748 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 AC097714.1-201ENST00000511272 1647 ntBASIC4.52□□□□□ -1.69
TRIM38O00635 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM38O00635 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM38O00635 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM38O00635 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 MTND5P3-201ENST00000438536 1800 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM38O00635 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM38O00635 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM38O00635 Y_RNA.813-201ENST00000364639 102 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.51□□□□□ -1.69
TRIM38O00635 MT-TC-201ENST00000387405 66 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AL121972.1-201ENST00000402023 252 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 Z98745.1-201ENST00000402553 494 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 TPMTP2-201ENST00000414372 726 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM38O00635 EIF1P1-201ENST00000421436 341 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM38O00635 AL356387.2-201ENST00000422272 243 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 CKS1BP5-201ENST00000434172 273 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM38O00635 AC092641.1-201ENST00000440229 772 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 VN1R34P-201ENST00000447387 883 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM38O00635 EPS15P1-201ENST00000448836 336 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 ZNF114P1-201ENST00000453500 292 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC090013.1-201ENST00000485147 480 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC092045.1-201ENST00000495716 1231 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM38O00635 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM38O00635 CBX3P3-201ENST00000508108 532 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 MTCO3P44-201ENST00000510977 541 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 RNU4-60P-201ENST00000517239 135 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM38O00635 BNIP3P5-201ENST00000562290 498 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM38O00635 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM38O00635 AC087683.1-201ENST00000591187 441 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC022146.1-201ENST00000595307 847 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC090186.1-201ENST00000605991 572 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 RNU4-89P-201ENST00000607443 133 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AL357080.1-201ENST00000617394 239 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 U73479.1-201ENST00000618062 168 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM38O00635 AC006065.5-201ENST00000623427 349 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 AC099063.3-201ENST00000642066 185 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM38O00635 AL136164.3-201ENST00000624429 3978 ntBASIC4.51□□□□□ -1.69
TRIM38O00635 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRIM38O00635 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM38O00635 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
TRIM38O00635 MFSD8-242ENST00000641690 4199 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM38O00635 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 KPNA2P2-201ENST00000419546 1489 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
TRIM38O00635 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 Y_RNA.302-201ENST00000364997 102 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 RNA5SP88-201ENST00000365560 109 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM38O00635 Y_RNA.560-201ENST00000384689 102 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 SNORA26.8-201ENST00000391306 124 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 RPL31P1-201ENST00000398116 372 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 DHFRP6-201ENST00000401776 268 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 MIR548F1-201ENST00000408667 84 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 FNDC3CP-201ENST00000420795 1155 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC093698.1-201ENST00000423843 571 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 AC127537.2-201ENST00000439258 465 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 SNRPEP8-201ENST00000442866 260 ntBASIC4.5□□□□□ -1.69
TRIM38O00635 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM38O00635 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM38O00635 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms