Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.61□□□□□ -1.99
SMKR1H3BMG3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 RNU1-75P-201ENST00000347264 129 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 OR6K3-202ENST00000368146 996 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 RNA5SP107-201ENST00000411358 122 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC068533.1-201ENST00000418542 415 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 OSTCP5-201ENST00000425293 453 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 HSPE1P28-201ENST00000443139 211 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 CDC27P1-201ENST00000445384 715 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC079776.3-201ENST00000450665 370 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 SUMO2P2-201ENST00000456482 255 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC006483.1-201ENST00000487308 313 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AP000563.1-201ENST00000490865 758 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC016550.1-201ENST00000505348 785 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC111000.2-201ENST00000507775 550 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC093840.1-201ENST00000511599 336 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC093853.1-201ENST00000515689 483 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 SNORA70.16-201ENST00000516390 95 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC104986.1-201ENST00000517978 436 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 DEFB130C-202ENST00000530001 230 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC037471.2-201ENST00000564941 598 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC120057.2-201ENST00000571520 271 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 MIR4310-201ENST00000582950 57 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AC005332.6-201ENST00000613178 446 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 MIR6719-201ENST00000622428 87 ntBASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMKR1H3BMG3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC011460.1-201ENST00000636268 1834 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 SNRPEP2-201ENST00000397592 279 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RN7SKP278-201ENST00000410504 342 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC016397.1-201ENST00000412463 242 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL024507.1-201ENST00000412741 274 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 BEND7P1-201ENST00000422058 457 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RPL27AP8-201ENST00000424277 446 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL121871.1-201ENST00000443413 436 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 SETD6P1-201ENST00000444575 317 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RAC1P7-201ENST00000445367 377 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RPL39P6-201ENST00000448289 150 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC010655.1-201ENST00000449336 292 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AL359385.1-201ENST00000456509 365 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 HMGN1P18-201ENST00000457642 277 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC026410.2-201ENST00000460281 156 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RPS4XP14-201ENST00000493072 781 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC112198.4-201ENST00000515450 351 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RNU2-27P-201ENST00000516185 142 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RNA5SP164-201ENST00000516533 110 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 RNU6-352P-201ENST00000516908 107 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC024224.1-201ENST00000538284 609 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC006518.1-201ENST00000541449 943 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC026333.2-201ENST00000542164 106 ntBASIC2.59□□□□□ -1.99
SMKR1H3BMG3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.59□□□□□ -1.99
SMKR1H3BMG3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms