Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 HMGN2P31-201ENST00000432430 273 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 COX7BP2-201ENST00000437976 242 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 RPL23AP16-201ENST00000441715 421 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 MTCO1P48-201ENST00000448024 1096 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 PDSS1P2-201ENST00000449397 678 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 RPL12P26-201ENST00000452430 487 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC025518.1-201ENST00000479856 347 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AP002812.1-201ENST00000495378 474 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC020893.1-201ENST00000502452 580 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 VWA8P1-201ENST00000510889 176 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC016065.2-201ENST00000514530 444 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 RN7SKP31-201ENST00000516354 278 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 IGKV2-26-201ENST00000518305 343 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 ZNF705CP-201ENST00000530515 889 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 TGIF1P1-201ENST00000558095 802 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 DUXAP3-201ENST00000603616 594 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC091946.2-201ENST00000606105 291 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC105429.2-201ENST00000610567 517 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 AP000676.4-201ENST00000624659 623 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 MIR6715B-201ENST00000637172 77 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 CDR1-202ENST00000625883 1485 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 SEPT7P7-201ENST00000420492 1301 ntBASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.4□□□□□ -1.87
TRBV5-4A0A0C4DH59 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL023807.1-201ENST00000407932 359 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 RNU2-28P-201ENST00000410457 189 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL050321.1-201ENST00000432363 400 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 ATP5F1P1-201ENST00000433775 569 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 RPL21P134-201ENST00000453468 483 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 WBP1LP4-201ENST00000505043 344 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC034244.1-201ENST00000507687 207 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC109445.1-201ENST00000512356 383 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 ARL2BPP6-201ENST00000512757 439 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 FABP5P12-201ENST00000515543 389 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 Y_RNA.717-201ENST00000517106 92 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AF186190.1-201ENST00000517470 480 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC090819.1-201ENST00000523800 1111 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL139174.1-201ENST00000531489 886 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC090502.2-201ENST00000549267 280 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 CENPUP2-201ENST00000555897 1186 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 HMGB3P26-201ENST00000560051 582 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC006557.5-201ENST00000603126 811 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC009220.3-201ENST00000604318 586 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC092106.3-201ENST00000611308 722 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC087683.2-201ENST00000611384 326 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 AC127502.3-201ENST00000636170 1206 ntBASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRBV5-4A0A0C4DH59 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms