Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SSXP4-201ENST00000451349 245 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 OR5AK3P-201ENST00000527486 1297 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 RN7SL339P-201ENST00000580597 296 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 PRELID3BP8-201ENST00000604148 295 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AL009028.1-201ENST00000604895 802 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AC131902.3-201ENST00000611767 581 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AC009032.1-201ENST00000617574 431 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.99□□□□□ -1.93
USH1CQ9Y6N9 AP001350.1-201ENST00000601906 1524 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 RPL9P7-201ENST00000330965 580 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AL589655.1-201ENST00000405398 482 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MIR1250-201ENST00000408098 113 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 YWHAZP8-201ENST00000436935 731 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 PRSS3P4-201ENST00000453323 162 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MRPL35P4-201ENST00000453682 566 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 RPL9P33-201ENST00000484311 566 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 OR9N1P-202ENST00000494289 481 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MTCO2P32-201ENST00000514865 403 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC010306.1-201ENST00000523223 1117 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AP000857.1-201ENST00000532151 543 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC012414.2-201ENST00000559474 187 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MIR4504-201ENST00000577413 92 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC005242.1-201ENST00000585658 438 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC015967.1-201ENST00000619893 476 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC009501.3-201ENST00000605001 1352 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 PABPC1P7-201ENST00000413177 1513 ntBASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USH1CQ9Y6N9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 RNU6-1243P-201ENST00000364028 107 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 RNA5SP72-201ENST00000364442 117 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 SNORA11.1-201ENST00000408133 129 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 RAD23BP2-201ENST00000416003 1207 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 UBE2V1P1-201ENST00000430836 445 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 RSL24D1P2-201ENST00000445584 366 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 NECAP1P2-201ENST00000455668 727 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 DYNLL1P6-201ENST00000503440 264 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 RNU6-551P-201ENST00000516661 103 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AC034105.3-201ENST00000565294 442 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 MIR3922-201ENST00000585192 84 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AC007566.2-201ENST00000603642 413 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 IGHV3-29-201ENST00000604817 344 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 MTND4P8-201ENST00000514997 1362 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 AL355596.1-201ENST00000565399 3996 ntBASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
USH1CQ9Y6N9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.93
USH1CQ9Y6N9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AL512646.1-201ENST00000269395 1077 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC073325.2-201ENST00000339545 159 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 OR6K3-202ENST00000368146 996 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC234772.1-201ENST00000377927 937 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 MIR34B-201ENST00000385076 84 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC073264.1-201ENST00000411508 416 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 OR6K1P-201ENST00000456766 971 ntBASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USH1CQ9Y6N9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms