Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AL359976.1-201ENST00000418655 3528 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNA5SP346-201ENST00000363541 121 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 SMIM11P1-201ENST00000369586 178 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNU6-190P-201ENST00000384154 102 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 SNORD51-201ENST00000384320 80 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.551-201ENST00000384661 102 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.555-201ENST00000384673 110 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.577-201ENST00000384794 101 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MIR517A-201ENST00000385001 87 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNU11-4P-201ENST00000391149 133 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 PPIAP10-201ENST00000438675 458 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 FTH1P25-201ENST00000447665 469 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 FTH1P2-201ENST00000466086 412 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC094085.1-201ENST00000468914 584 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RPL12P30-201ENST00000488389 499 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 FTH1P24-201ENST00000503502 462 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC083829.1-201ENST00000503756 657 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 GAPDHP62-201ENST00000515313 990 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 SNORA25.11-201ENST00000515935 105 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNU6-138P-201ENST00000515952 107 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNU6-27P-201ENST00000516146 107 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.700-201ENST00000516806 100 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNU7-4P-201ENST00000516961 62 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AL358913.1-201ENST00000554342 121 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MIR5188-201ENST00000583467 113 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC027229.1-201ENST00000583887 253 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC174048.1-201ENST00000603389 144 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MIR6862-1-201ENST00000613016 70 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MIR6862-2-201ENST00000614755 70 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 MIR6811-201ENST00000620409 58 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC110801.1-201ENST00000623590 212 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC091925.2-201ENST00000625059 256 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 CYP4F35P-202ENST00000636121 390 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC092070.2-203ENST00000598377 3644 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 AC008669.1-201ENST00000565823 2178 ntBASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.76□□□□□ -1.49
HRH3Q9Y5N1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 EIF2AP4-201ENST00000424793 1781 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC009951.1-201ENST00000623674 2614 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 RNU6-842P-201ENST00000384269 107 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.562-201ENST00000384695 113 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 RNU6-1093P-201ENST00000391194 107 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC108032.1-201ENST00000416706 207 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 PSMA2P3-201ENST00000429685 675 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AL445928.1-201ENST00000435545 222 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AL121871.1-201ENST00000443413 436 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC008481.1-201ENST00000463278 396 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 RN7SL643P-201ENST00000471845 291 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC069499.1-201ENST00000489433 509 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 CEACAMP10-202ENST00000495431 496 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.673-201ENST00000516306 88 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 snoU109.6-201ENST00000516831 118 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 IGKV2D-23-201ENST00000518179 286 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 IGKV3D-25-201ENST00000519599 235 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 IGHV4-55-201ENST00000520889 368 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC063949.1-201ENST00000552900 865 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 SULT1C2P2-201ENST00000562517 294 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC233702.7-202ENST00000582941 211 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC007566.2-201ENST00000603642 413 ntBASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 MIR6729-201ENST00000618194 65 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms