Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNY1P12-201ENST00000364251 105 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-114P-201ENST00000384704 105 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-278P-201ENST00000390945 109 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU4-78P-201ENST00000410940 126 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 BEND7P1-201ENST00000422058 457 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC119618.1-201ENST00000434191 222 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC093392.2-201ENST00000450682 337 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 RN7SL814P-201ENST00000487715 300 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC093278.1-201ENST00000494700 600 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC114967.1-201ENST00000504890 259 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010350.1-201ENST00000504908 231 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 HMGB1P29-201ENST00000505659 499 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC108078.1-201ENST00000508073 725 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-528P-201ENST00000516926 100 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AP003181.2-201ENST00000528941 181 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR3146-201ENST00000580367 79 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 COX6CP3-201ENST00000580869 223 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC090616.5-202ENST00000582111 297 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC209154.1-201ENST00000582156 337 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AP005432.2-201ENST00000608162 586 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 OR6R2P-201ENST00000609216 300 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AL355472.4-201ENST00000610233 626 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 AC006065.5-201ENST00000623427 349 ntBASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA9Q9Y5G4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR298-201ENST00000401212 88 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC127391.1-201ENST00000411737 98 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 BX295541.1-201ENST00000417774 250 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 OR1H1P-201ENST00000448731 937 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC234775.1-201ENST00000454247 670 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 MTND1P12-201ENST00000455231 147 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL359385.1-201ENST00000456509 365 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL672167.3-201ENST00000465951 960 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 RN7SL354P-201ENST00000469282 294 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 RBM43P1-201ENST00000476891 1081 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 MTND4LP26-201ENST00000518144 282 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 UBE2L4-201ENST00000587688 464 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC011626.1-201ENST00000604710 562 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC007684.1-201ENST00000609671 477 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL133173.2-201ENST00000614270 90 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL158209.2-201ENST00000619266 216 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 BX005214.3-202ENST00000619809 325 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC012150.2-201ENST00000621300 544 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL158801.5-201ENST00000623123 465 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC124864.2-201ENST00000624736 186 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL160394.1-201ENST00000624765 724 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC244258.1-201ENST00000637553 1071 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms