Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 Y_RNA.6-201ENST00000362350 114 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 RNU6-146P-201ENST00000384602 108 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AL078604.1-201ENST00000404609 466 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 RPL17P12-201ENST00000413391 526 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AL389915.1-201ENST00000422463 466 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 SDCBPP2-201ENST00000424643 885 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 COX6CP15-201ENST00000426313 211 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 TRGVB-201ENST00000453257 471 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC097493.1-201ENST00000463958 372 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC010301.1-201ENST00000473936 355 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 S100A11P1-201ENST00000477525 312 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC008958.1-201ENST00000511047 682 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 DUXAP2-201ENST00000519198 589 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 OR4A12P-201ENST00000530847 918 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AL139174.1-201ENST00000531489 886 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC245505.1-201ENST00000556398 224 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC015912.2-201ENST00000571053 181 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 NDUFA8P1-201ENST00000605525 367 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 AC112484.5-201ENST00000624189 228 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 RNA5SP196-201ENST00000625967 102 ntBASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX2IPQ9Y2D8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 LARP1BP1-201ENST00000506036 1359 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AL031985.3-201ENST00000565390 2449 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 OR4G11P-202ENST00000642116 1414 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RNU1-13P-201ENST00000384499 162 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RNA5SP317-201ENST00000410176 116 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RNA5SP311-201ENST00000411290 116 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RAD23BP2-201ENST00000416003 1207 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 EIF1P3-201ENST00000423841 334 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 ZYG11AP1-201ENST00000430329 837 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 MTND1P28-201ENST00000435623 950 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC010460.1-201ENST00000507087 466 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AL592156.1-201ENST00000508758 304 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 KCTD9P2-201ENST00000512203 1013 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC026412.2-201ENST00000512270 1075 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RNA5SP315-201ENST00000516340 116 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 RNA5SP312-201ENST00000517068 116 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 IGHV3-32-201ENST00000519182 355 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AP003392.2-201ENST00000527269 208 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC100770.1-201ENST00000532310 322 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 TRAV8-5-201ENST00000537369 341 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AC135001.1-201ENST00000544546 283 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 SULT1C2P1-202ENST00000562418 459 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 XPOTP1-201ENST00000443317 2398 ntBASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX2IPQ9Y2D8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 AC092447.7-201ENST00000422212 1621 ntBASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.65□□□□□ -1.66
SSX2IPQ9Y2D8 SPRR2C-201ENST00000290702 219 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms