Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 RPL7P4-203ENST00000430239 730 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AC018710.1-201ENST00000506509 158 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 RN7SKP298-201ENST00000515950 94 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 RNA5SP73-201ENST00000516744 108 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AC007991.1-201ENST00000522680 631 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 OR4K7P-201ENST00000580232 945 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AC060780.3-201ENST00000589464 80 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AL133255.1-201ENST00000606374 441 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 STMN1P1-201ENST00000617809 440 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 AL731532.2-201ENST00000623542 1953 ntBASIC6.5□□□□□ -1.37
COL17A1Q9UMD9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AL445487.1-201ENST00000415694 1580 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 ENSAP3-201ENST00000312710 333 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 RNU6-707P-201ENST00000364647 95 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC093084.1-201ENST00000424233 687 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 HSPE1P16-201ENST00000426640 348 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AL353093.1-201ENST00000441292 436 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 HSPE1P28-201ENST00000443139 211 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 HMGB1P16-201ENST00000447155 540 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC005002.1-201ENST00000447458 540 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 DDX39BP2-208ENST00000453923 258 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 FGF7P3-201ENST00000454645 303 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 RPS4XP12-201ENST00000461747 709 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC008481.1-201ENST00000463278 396 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC022483.1-201ENST00000514020 567 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 RNU6-1046P-201ENST00000516538 107 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC005832.3-201ENST00000537929 631 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC068993.1-201ENST00000546724 589 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AL359212.1-201ENST00000556608 614 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC018690.1-201ENST00000608144 626 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AL020991.1-201ENST00000612314 373 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AF001550.2-201ENST00000636643 217 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 AC008013.2-202ENST00000637965 364 ntBASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.49□□□□□ -1.37
COL17A1Q9UMD9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 TBCAP1-201ENST00000436520 327 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC079776.3-201ENST00000450665 370 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC026801.2-201ENST00000515352 425 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 RNA5SP360-201ENST00000516555 118 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC025260.1-201ENST00000548858 430 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 LSM3P2-201ENST00000551246 273 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 MIR4528-201ENST00000577763 90 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC103881.1-201ENST00000603476 538 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC069209.1-201ENST00000619282 651 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AL078596.1-201ENST00000624856 447 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 NSRP1P1-201ENST00000444067 1693 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 AC107982.1-201ENST00000507171 1300 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 THAP12P5-201ENST00000405864 2275 ntBASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL17A1Q9UMD9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RNA5SP72-201ENST00000364442 117 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 OR1L1-202ENST00000373686 1083 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms