Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 MTND1P35-201ENST00000526739 508 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 FAM92A1P1-201ENST00000528023 890 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC015912.2-201ENST00000571053 181 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 FAM27D1-201ENST00000612308 341 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL158196.1-201ENST00000616786 434 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL354798.1-201ENST00000622505 329 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL353743.4-201ENST00000422653 1547 ntBASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH3Q9UM47 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.89
NOTCH3Q9UM47 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.89
NOTCH3Q9UM47 TCP11X1-202ENST00000622971 1372 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RNA5SP130-201ENST00000364431 114 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.279-201ENST00000364763 95 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MIR491-201ENST00000384877 84 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC097374.1-203ENST00000400783 485 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RPL17P12-201ENST00000413391 526 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 TAF13P2-201ENST00000416876 286 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC007435.1-201ENST00000421086 415 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL513185.2-201ENST00000425543 193 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ZYG11AP1-201ENST00000430329 837 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL356276.2-201ENST00000435919 558 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL935212.3-201ENST00000450729 284 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 CCDC34P1-201ENST00000507441 517 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RNA5SP446-201ENST00000515955 82 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 CBX3P5-201ENST00000552017 521 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 PCMTD1P2-201ENST00000565017 355 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RPS3AP23-202ENST00000574601 686 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL592295.2-201ENST00000612578 206 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL357080.1-201ENST00000617394 239 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC073348.1-201ENST00000623002 331 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL645937.1-201ENST00000641739 1652 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 CR383658.2-201ENST00000547576 1525 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RNU1-83P-201ENST00000363426 164 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RNU6-1090P-201ENST00000364065 94 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RNU6-877P-201ENST00000383868 107 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 FCF1P10-201ENST00000407590 479 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 SEPT7P8-201ENST00000413308 775 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MTCO1P20-201ENST00000425366 358 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL450263.2-201ENST00000439400 589 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 RPL39P6-201ENST00000448289 150 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ARL2BPP5-201ENST00000523141 481 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms