Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MTND4LP24-201ENST00000572277 291 ntBASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 AC006249.1-201ENST00000621223 471 ntBASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 AC012442.3-202ENST00000636742 206 ntBASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 ZNF807-201ENST00000328088 1707 ntBASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
COMMD3Q9UBI1 CUL1P1-201ENST00000509510 2425 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AL355596.1-201ENST00000565399 3996 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 U8.8-201ENST00000365399 135 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RNU1-64P-201ENST00000365443 163 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RNU6-317P-201ENST00000384031 107 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 U3.19-201ENST00000390893 196 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RPS3AP26-201ENST00000398259 784 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 YPEL5P1-201ENST00000419731 367 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 CR769767.1-201ENST00000436337 346 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AL513343.1-201ENST00000451818 792 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AC133134.1-201ENST00000466800 359 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 SEM1P1-201ENST00000506694 209 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 MTCO2P32-201ENST00000514865 403 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RNU1-45P-201ENST00000517191 141 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 CKS1BP7-201ENST00000522230 235 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 MIR5092-201ENST00000583139 88 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 RPL23AP78-201ENST00000599928 470 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 BDH2P1-201ENST00000602288 736 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 DUXAP3-201ENST00000603616 594 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 MIR6864-201ENST00000617935 70 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AC007342.8-201ENST00000623278 678 ntBASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3Q9UBI1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AP001350.1-201ENST00000601906 1524 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AL136520.1-201ENST00000600311 1322 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 FRG1BP-201ENST00000278882 761 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 RNA5SP391-201ENST00000363456 119 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 ANAPC10P1-201ENST00000395991 556 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 ARF4P3-201ENST00000397387 509 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 HNRNPDP2-201ENST00000406475 478 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 MIR1289-1-201ENST00000408836 144 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 RPL21P66-201ENST00000426566 466 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 EIF2S2P3-201ENST00000428356 999 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC112492.1-201ENST00000449607 712 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC090543.1-201ENST00000492168 485 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC083906.5-201ENST00000503722 328 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 RNU1-61P-201ENST00000516107 151 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 RN7SKP277-201ENST00000516895 283 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 PSMA2P1-201ENST00000526365 646 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC119501.1-201ENST00000603646 475 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC039056.2-201ENST00000622261 511 ntBASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3Q9UBI1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.05
COMMD3Q9UBI1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 RNA5SP479-201ENST00000364858 117 ntBASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 SNORA48.5-201ENST00000391143 135 ntBASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 TOMM22P1-201ENST00000418578 312 ntBASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 USP9YP20-201ENST00000419224 558 ntBASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.27□□□□□ -2.05
COMMD3Q9UBI1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms