Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR4286-201ENST00000580651 93 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL20A1Q9P218 RSL24D1P11-201ENST00000591045 491 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 MIR6868-201ENST00000611215 58 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC009878.1-201ENST00000621819 340 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL20A1Q9P218 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL20A1Q9P218 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AL049555.1-201ENST00000562834 1933 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 MTND4P16-201ENST00000466108 1367 ntBASIC4.65□□□□□ -1.66
COL20A1Q9P218 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.65□□□□□ -1.66
COL20A1Q9P218 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.66
COL20A1Q9P218 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL20A1Q9P218 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
COL20A1Q9P218 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL20A1Q9P218 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL20A1Q9P218 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
COL20A1Q9P218 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
COL20A1Q9P218 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 RNVU1-3-201ENST00000364313 161 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 RNU6-878P-201ENST00000384578 110 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 Y_RNA.553-201ENST00000384670 102 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 RNY3P10-201ENST00000384764 102 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 DHFRP6-201ENST00000401776 268 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AL445189.1-201ENST00000405722 338 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 RN7SKP266-201ENST00000410232 287 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 AL353706.1-201ENST00000436728 494 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AL117351.1-201ENST00000438864 766 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 MTND6P18-201ENST00000439477 513 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 MTND5P14-201ENST00000441481 1267 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 COX6CP12-201ENST00000446748 202 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC239367.2-201ENST00000447309 705 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 RNA5SP269-201ENST00000459032 137 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AL136126.1-201ENST00000473603 402 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC010460.1-201ENST00000507087 466 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 AP004247.1-201ENST00000531556 1289 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC083760.1-201ENST00000589621 670 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 BNIP3P23-201ENST00000599655 511 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC119751.7-201ENST00000600494 245 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC068790.2-201ENST00000602601 557 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC115621.1-201ENST00000604653 858 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC090186.1-201ENST00000605991 572 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AL008729.2-201ENST00000606393 473 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 AC025594.3-201ENST00000613068 790 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 MIR6500-201ENST00000622700 86 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL20A1Q9P218 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL20A1Q9P218 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL20A1Q9P218 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
COL20A1Q9P218 MTND4P4-201ENST00000439033 1366 ntBASIC4.65□□□□□ -1.67
COL20A1Q9P218 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 SCN1A-220ENST00000641603 12506 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL20A1Q9P218 AL139811.1-201ENST00000424779 2299 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RNU6-952P-201ENST00000391164 108 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 MIR1250-201ENST00000408098 113 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 MIR1305-201ENST00000408300 86 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RPL17P12-201ENST00000413391 526 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 OR5BE1P-201ENST00000425977 939 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 AL691449.1-201ENST00000426570 421 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 AL035410.1-201ENST00000427409 427 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RPL37P21-201ENST00000435890 276 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RPL23AP89-201ENST00000439324 255 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 MTCO1P27-201ENST00000448269 226 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RPL7P31-201ENST00000450192 724 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 RN7SL542P-201ENST00000467147 294 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RPL31P50-201ENST00000471002 296 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 AC104563.1-201ENST00000476147 376 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 SAP18P1-201ENST00000512058 390 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.64□□□□□ -1.67
COL20A1Q9P218 COX6CP8-201ENST00000522620 226 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 CENPUP2-201ENST00000555897 1186 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 HNRNPCP4-201ENST00000571636 900 ntBASIC4.64□□□□□ -1.67
COL20A1Q9P218 RPL23AP87-202ENST00000573039 466 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms