Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 HMGN2P7-201ENST00000456186 273 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AL133477.1-201ENST00000457472 514 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 snoU13.4-201ENST00000458916 104 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 XKRY-201ENST00000510392 1100 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 MTCO2P32-201ENST00000514865 403 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AC093853.1-201ENST00000515689 483 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 RN7SKP244-201ENST00000516513 307 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 NBEAP1-201ENST00000554452 979 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 MIR4286-201ENST00000580651 93 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 MIR486-1-201ENST00000612171 68 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 AC231657.1-201ENST00000624313 397 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 MAPK10-372ENST00000641954 3413 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.23□□□□□ -1.73
BLOC1S4Q9NUP1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 Y_RNA.408-201ENST00000383987 102 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 SNORA3.3-201ENST00000408712 125 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 RPL21P109-201ENST00000422213 475 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 EZH2P1-201ENST00000431167 291 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 RPS29P7-201ENST00000439662 171 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 RPL12P26-201ENST00000452430 487 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC098824.1-201ENST00000453565 980 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 FAM172BP-201ENST00000487497 1089 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 TMEM251P1-201ENST00000503717 318 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 COX7A2P2-201ENST00000505291 250 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC004069.2-201ENST00000505438 1114 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC004062.1-201ENST00000509926 645 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC007991.1-201ENST00000522680 631 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC126177.3-201ENST00000551839 688 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC022916.3-201ENST00000592961 742 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC105148.1-201ENST00000604961 409 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 RNU1-30P-201ENST00000606575 163 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 AC131235.4-201ENST00000609288 620 ntBASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.22□□□□□ -1.73
BLOC1S4Q9NUP1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.73
BLOC1S4Q9NUP1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
BLOC1S4Q9NUP1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
BLOC1S4Q9NUP1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 SNORD3H-201ENST00000384486 214 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 RNU1-89P-201ENST00000384592 164 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 ATP5F1P4-201ENST00000397288 746 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 HMGB1P49-201ENST00000418882 569 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AL137014.1-201ENST00000420490 1226 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AL139247.1-201ENST00000422768 325 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 MUPP-201ENST00000438111 566 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 SNORD11.1-201ENST00000459482 85 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC097493.1-201ENST00000463958 372 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC090281.1-201ENST00000523019 276 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC084824.1-201ENST00000550917 1005 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 SETP7-201ENST00000552169 453 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 MTND4P33-201ENST00000556706 766 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AL163642.2-201ENST00000604722 1019 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 HMGB1P50-201ENST00000605814 607 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 AC009974.1-201ENST00000608881 455 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 VIS1.1-201ENST00000610517 203 ntBASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.21□□□□□ -1.74
BLOC1S4Q9NUP1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms