Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RPL31P1-201ENST00000398116 372 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 RNU4-65P-201ENST00000410473 140 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 RPL7P46-201ENST00000425129 740 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 YME1L1P1-201ENST00000429435 297 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC005189.1-201ENST00000431286 310 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC044797.1-201ENST00000445744 679 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC089999.1-201ENST00000460336 374 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 RN7SKP43-201ENST00000516173 320 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 RNA5SP468-201ENST00000516782 93 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 SNORD59.2-201ENST00000516873 68 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC103833.1-201ENST00000517442 172 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 TRAV37-201ENST00000553906 342 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 MIR5004-201ENST00000579078 107 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AL009028.1-201ENST00000604895 802 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC100814.1-201ENST00000606963 623 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC012314.7-201ENST00000619693 93 ntBASIC3.06□□□□□ -1.92
TREX1Q9NSU2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.06□□□□□ -1.92
TREX1Q9NSU2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 RNU6-543P-201ENST00000362576 108 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 RNA5SP72-201ENST00000364442 117 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 MIR670-201ENST00000390142 98 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 RPS3AP26-201ENST00000398259 784 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC092745.2-202ENST00000411880 369 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 TOMM22P1-201ENST00000418578 312 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL353678.1-201ENST00000422735 741 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 ZFAND6P1-201ENST00000434138 605 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC006028.1-201ENST00000438379 402 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 SYPL1P1-201ENST00000473622 768 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC025181.1-201ENST00000477507 416 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC027104.1-201ENST00000563702 681 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 MIR4504-201ENST00000577413 92 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC007566.2-201ENST00000603642 413 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC091488.1-201ENST00000604239 660 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL450270.1-201ENST00000606160 391 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 STMN1P1-201ENST00000617809 440 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 AC026422.1-201ENST00000623961 452 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.05□□□□□ -1.92
TREX1Q9NSU2 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
TREX1Q9NSU2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AL355578.1-201ENST00000607405 1328 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AL512646.1-201ENST00000269395 1077 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 RNU6-1005P-201ENST00000384519 107 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 MIR23B-201ENST00000384832 97 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 MTND3P20-201ENST00000407663 186 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 RPL7P8-201ENST00000411964 730 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 HSPE1P1-201ENST00000421494 318 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 YWHAZP8-201ENST00000436935 731 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC233982.1-201ENST00000451247 436 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AL035407.2-201ENST00000454090 378 ntBASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.04□□□□□ -1.92
TREX1Q9NSU2 AC108729.2-201ENST00000476543 840 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms