Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 RNA5SP513-201ENST00000364648 118 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC007066.1-201ENST00000392902 381 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 MIR320C1-201ENST00000408566 88 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 RNU4-78P-201ENST00000410940 126 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 PGBD4P8-201ENST00000412993 562 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC127526.1-201ENST00000417526 366 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AIMP1P1-201ENST00000418670 937 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 Z99497.1-201ENST00000421282 135 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC009480.2-201ENST00000422916 432 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 GSTA7P-201ENST00000438425 448 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 ISCA1P2-201ENST00000438679 421 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 HMGB1P15-201ENST00000453854 435 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 SNRPGP5-201ENST00000456003 220 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 SETP11-201ENST00000473027 690 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC104563.1-201ENST00000476147 376 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC093267.1-201ENST00000489176 961 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC023424.2-201ENST00000493479 777 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL592156.1-201ENST00000508758 304 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 OR5BM1P-201ENST00000512021 366 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC091515.1-201ENST00000548110 679 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC090616.5-202ENST00000582111 297 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 MIR4697-201ENST00000582977 78 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL353997.4-201ENST00000586196 166 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 WISP1-OT1-201ENST00000602893 642 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 MTCYBP22-201ENST00000603788 447 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL596245.1-201ENST00000618994 362 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC048344.4-201ENST00000619744 527 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL773545.4-201ENST00000637262 310 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AC006927.3-201ENST00000638789 384 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 AL513478.4-201ENST00000641636 310 ntBASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC6A13Q9NSD5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.9□□□□□ -1.78
SLC6A13Q9NSD5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.9□□□□□ -1.78
SLC6A13Q9NSD5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SLC6A13Q9NSD5 AC008725.1-201ENST00000605123 2263 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 XIAPP3-201ENST00000312918 795 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 HSFY4P-201ENST00000415994 1181 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 CYP4F29P-201ENST00000420685 446 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 COX6CP17-201ENST00000421389 185 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 AC016712.1-201ENST00000431088 378 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 RPS3AP54-201ENST00000435535 734 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC6A13Q9NSD5 Z95327.1-201ENST00000446082 482 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms