Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS45Q9NRW7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS45Q9NRW7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS45Q9NRW7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.55□□□□□ -1.68
VPS45Q9NRW7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 SPRR2C-201ENST00000290702 219 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 RNU6-374P-201ENST00000364146 108 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 RNA5SP88-201ENST00000365560 109 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 RNU6-657P-201ENST00000383904 107 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 MIR554-201ENST00000384874 96 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 MIR670-201ENST00000390142 98 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 PPIAP31-201ENST00000405422 495 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 MTCO3P41-201ENST00000414801 328 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC006366.1-201ENST00000422002 759 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AL132765.1-201ENST00000434165 553 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 USP9YP28-201ENST00000435142 589 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 RPS3AP54-201ENST00000435535 734 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 UBE2FP3-201ENST00000436366 524 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC092427.1-201ENST00000439177 601 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC006499.5-201ENST00000505037 514 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 RNA5SP154-201ENST00000516193 111 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC023632.4-201ENST00000517783 191 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC006362.1-201ENST00000567392 174 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC053481.3-201ENST00000577881 843 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC128687.1-201ENST00000605304 619 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 RNU6-88P-201ENST00000606801 100 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AL031775.1-201ENST00000607014 887 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AL391497.1-201ENST00000608671 547 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC012360.2-201ENST00000609349 391 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AP000254.1-201ENST00000609934 520 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 CYP3A51P-201ENST00000633513 256 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AL079343.1-201ENST00000572358 1771 ntBASIC4.54□□□□□ -1.68
VPS45Q9NRW7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS45Q9NRW7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 MTND5P24-201ENST00000438892 1767 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AL133243.3-201ENST00000617415 3004 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 RNA5SP56-201ENST00000410277 118 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 RN7SKP142-201ENST00000411236 328 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC073335.1-201ENST00000427776 363 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 MTCO1P19-201ENST00000443487 500 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 VN1R34P-201ENST00000447387 883 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 RPL39P6-201ENST00000448289 150 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 RNU6-956P-201ENST00000458868 103 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC026410.2-201ENST00000460281 156 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC092757.1-201ENST00000467293 467 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 S100A11P1-201ENST00000477525 312 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC090013.1-201ENST00000485147 480 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 OR4G11P-201ENST00000492842 939 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC068790.6-201ENST00000602558 258 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 IGHV3-29-201ENST00000604817 344 ntBASIC4.53□□□□□ -1.68
VPS45Q9NRW7 AC018816.2-201ENST00000621460 353 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms