Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RNU6-685P-201ENST00000517088 95 ntBASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AC139365.2-201ENST00000517972 253 ntBASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AC022790.1-201ENST00000522872 204 ntBASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 TRIM77BP-201ENST00000524985 1119 ntBASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AP000827.1-201ENST00000527814 258 ntBASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 RNU4ATAC-201ENST00000580972 127 ntBASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NEUROD4Q9HD90 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 Y_RNA.428-201ENST00000384078 102 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 RNU6-472P-201ENST00000384299 107 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 Y_RNA.493-201ENST00000384422 102 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AL583834.1-201ENST00000406943 343 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC016769.2-201ENST00000414815 475 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 RPS15AP40-201ENST00000419621 391 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 RPL7AP14-201ENST00000424041 802 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 RPL21P112-201ENST00000434403 463 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 GAPDHP59-201ENST00000435908 267 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 HSFY6P-201ENST00000445573 403 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC010733.1-201ENST00000451515 401 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC117503.1-201ENST00000472241 394 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 CEACAMP10-202ENST00000495431 496 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 RNY3P15-201ENST00000516297 97 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 RNU6-1332P-201ENST00000516666 104 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 HMGB3P26-201ENST00000560051 582 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 AL445363.3-201ENST00000623080 671 ntBASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.74□□□□□ -1.49
NEUROD4Q9HD90 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 Z95327.2-201ENST00000414579 1873 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 RNU6-95P-201ENST00000384697 107 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 U3.25-201ENST00000391209 220 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 SNRPEP6-201ENST00000407465 277 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 RNA5SP156-201ENST00000410250 110 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 AC011933.1-201ENST00000413334 321 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 AC069213.2-201ENST00000420238 366 ntBASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.73□□□□□ -1.49
NEUROD4Q9HD90 RPL23AP38-201ENST00000423801 469 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms