Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU6-619P-201ENST00000365146 108 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 MIR708-201ENST00000390708 88 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 HMGB3P22-202ENST00000451823 572 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 RPL7P38-201ENST00000488396 739 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC134050.1-201ENST00000495088 933 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC139783.2-201ENST00000504847 1145 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 SNORD116-26-201ENST00000516006 96 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AGGF1P5-201ENST00000567900 919 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC074051.3-201ENST00000570238 358 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 VN1R83P-201ENST00000595685 445 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 MIR7106-201ENST00000612419 65 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 AL512506.2-201ENST00000624472 458 ntBASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZNF541Q9H0D2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC025125.1-201ENST00000624743 1922 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AL355578.1-201ENST00000607405 1328 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RNU6-839P-201ENST00000363347 108 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RNU6-707P-201ENST00000364647 95 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RNU6-1293P-201ENST00000384077 107 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 HLFP1-201ENST00000402375 499 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 ZNF603P-201ENST00000405613 487 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RN7SKP111-201ENST00000410349 271 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AL592310.1-201ENST00000414330 671 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AL513175.2-201ENST00000422071 443 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RPP40P1-201ENST00000426762 456 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 NANOGP2-201ENST00000435391 727 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 USP9YP22-201ENST00000438971 294 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC007327.1-201ENST00000447461 264 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC079776.3-201ENST00000450665 370 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC098824.1-201ENST00000453565 980 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 FGF7P3-201ENST00000454645 303 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC010301.1-201ENST00000473936 355 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC108734.3-201ENST00000481241 1165 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 HMGB1P21-201ENST00000502313 581 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 FCF1P8-201ENST00000510322 597 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 HNRNPKP5-201ENST00000515300 253 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC027309.2-201ENST00000520566 192 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AP001189.2-201ENST00000527320 189 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC004024.1-201ENST00000549244 247 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AGGF1P8-201ENST00000562979 1000 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 GAS5-AS1-201ENST00000602767 694 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RPL12P50-201ENST00000603116 116 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC016877.3-201ENST00000606778 504 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC063944.3-201ENST00000609969 533 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AL158163.2-201ENST00000619110 700 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC022509.4-201ENST00000621404 572 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 RNU6-156P-201ENST00000621869 107 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC007998.5-201ENST00000622938 237 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 AC000123.2-201ENST00000623124 461 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 DBF4P1-201ENST00000412976 1892 ntBASIC4.16□□□□□ -1.74
ZNF541Q9H0D2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ZNF541Q9H0D2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.15□□□□□ -1.74
ZNF541Q9H0D2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF541Q9H0D2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.74
ZNF541Q9H0D2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZNF541Q9H0D2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.15□□□□□ -1.74
ZNF541Q9H0D2 AC118273.1-201ENST00000525324 3006 ntBASIC4.15□□□□□ -1.75
ZNF541Q9H0D2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms