Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ELOCP35-201ENST00000604289 336 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC097478.2-201ENST00000610572 514 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC092106.3-201ENST00000611308 722 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AL512506.2-201ENST00000624472 458 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC048347.1-201ENST00000624621 427 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 Z99496.1-201ENST00000469424 1477 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-1066P-201ENST00000363573 105 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 Y_RNA.465-201ENST00000384293 102 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 SNORD116-23-201ENST00000384645 92 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-1300P-201ENST00000391046 108 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AF228730.1-201ENST00000397972 663 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 MTND4P13-201ENST00000402078 1023 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 MTND2P16-201ENST00000419987 799 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC005005.2-201ENST00000420779 380 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 MRPS36P1-201ENST00000421291 307 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC010099.3-201ENST00000423896 409 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL591419.1-201ENST00000427423 339 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 SEPT7P5-201ENST00000434048 306 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC073143.1-201ENST00000436316 395 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC105402.2-201ENST00000438503 358 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 MTCO2P25-201ENST00000447065 681 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 RPL23AP15-201ENST00000450202 459 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 PPIAP3-201ENST00000450588 505 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 HMGN3P1-201ENST00000453847 193 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 USP9YP25-201ENST00000457708 443 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC023598.1-201ENST00000472521 361 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC004263.1-201ENST00000479327 332 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 RN7SL323P-201ENST00000494712 295 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC078918.1-201ENST00000498515 228 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC109471.1-201ENST00000511631 612 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 SOD1P3-201ENST00000518682 454 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 DUXAP5-201ENST00000529668 529 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC023538.1-201ENST00000534576 736 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC074029.1-201ENST00000552531 1044 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 OR4T1P-201ENST00000554933 911 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC023575.1-201ENST00000580510 358 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 MIR3939-201ENST00000582614 106 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC008687.2-201ENST00000597865 520 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL357094.1-201ENST00000603845 844 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC107075.1-201ENST00000613695 314 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AP002791.1-201ENST00000623291 381 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC006065.5-201ENST00000623427 349 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC073476.4-201ENST00000628409 72 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 NMD3P1-201ENST00000439704 1488 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AL672296.1-201ENST00000427780 2158 ntBASIC3.45□□□□□ -1.86
CCDC28BQ9BUN5 AC118273.1-201ENST00000525324 3006 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-582P-201ENST00000362989 107 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 MIR323B-201ENST00000385269 82 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AL121978.1-201ENST00000402778 359 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 VPS26BP1-201ENST00000417155 755 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC008280.1-201ENST00000418851 412 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC245054.1-201ENST00000420944 258 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AL513174.1-201ENST00000423182 629 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 RPL7P44-201ENST00000424827 742 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms