Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.22□□□□□ -1.89
VGLL1Q99990 AC009229.4-201ENST00000623854 1947 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VGLL1Q99990 MTCYBP36-201ENST00000404146 440 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.21□□□□□ -1.9
VGLL1Q99990 RHEBP3-201ENST00000411920 351 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.21□□□□□ -1.9
VGLL1Q99990 FNDC3CP-201ENST00000420795 1155 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 UQCRBP1-201ENST00000421129 336 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 EIF1P3-201ENST00000423841 334 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC104651.1-201ENST00000427559 735 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC092013.1-201ENST00000438795 332 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 RPL23AP89-201ENST00000439324 255 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 DNAJC19P4-201ENST00000440115 345 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AL022238.1-201ENST00000442557 355 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 RPL39P6-201ENST00000448289 150 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.21□□□□□ -1.9
VGLL1Q99990 DHFRP3-201ENST00000455595 559 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 RPL21P126-201ENST00000470049 478 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AP000893.1-201ENST00000474462 794 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 S100A11P1-201ENST00000477525 312 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AP000797.1-201ENST00000478870 387 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC068305.1-201ENST00000497406 726 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.21□□□□□ -1.9
VGLL1Q99990 FABP5P5-201ENST00000515537 406 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 OR4A45P-201ENST00000529954 901 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AL109766.1-201ENST00000555080 552 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 MIR4528-201ENST00000577763 90 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 MIR4480-201ENST00000582492 71 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC083760.1-201ENST00000589621 670 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC091805.2-201ENST00000603848 235 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AL354984.3-201ENST00000604803 325 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC090948.2-201ENST00000607363 564 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC108747.1-201ENST00000609508 535 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC064801.1-201ENST00000612025 407 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC116447.1-201ENST00000613153 453 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AP005019.3-201ENST00000620418 560 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AC008785.1-201ENST00000624475 456 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC068137.3-201ENST00000639191 341 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.21□□□□□ -1.9
VGLL1Q99990 AC073869.6-201ENST00000640656 341 ntBASIC3.21□□□□□ -1.9
VGLL1Q99990 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VGLL1Q99990 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.21□□□□□ -1.9
VGLL1Q99990 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VGLL1Q99990 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.2□□□□□ -1.9
VGLL1Q99990 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VGLL1Q99990 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.2□□□□□ -1.9
VGLL1Q99990 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.2□□□□□ -1.9
VGLL1Q99990 AC092447.7-201ENST00000422212 1621 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.2□□□□□ -1.9
VGLL1Q99990 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VGLL1Q99990 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VGLL1Q99990 AC011155.1-201ENST00000316512 456 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VGLL1Q99990 MIR331-201ENST00000362302 94 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 Y_RNA.6-201ENST00000362350 114 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 SNORA58B-201ENST00000364259 136 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 RNU6-777P-201ENST00000364265 104 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.2□□□□□ -1.9
VGLL1Q99990 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
VGLL1Q99990 RNU6-1293P-201ENST00000384077 107 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 SNORA70F-201ENST00000384142 135 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 RNU6-297P-201ENST00000384636 107 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 AL583835.1-201ENST00000399570 407 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VGLL1Q99990 RNU6-248P-201ENST00000410720 107 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 RN7SKP33-201ENST00000410942 340 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 RNU6-603P-201ENST00000411403 107 ntBASIC3.2□□□□□ -1.9
VGLL1Q99990 RPL7P30-201ENST00000420888 709 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms