Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC010300.1-201ENST00000600671 5134 ntBASIC2.36□□□□□ -2.03
VPS13AQ96RL7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 ELOCP13-201ENST00000443934 329 ntBASIC2.36□□□□□ -2.03
VPS13AQ96RL7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 SNORA64.4-201ENST00000516632 81 ntBASIC2.36□□□□□ -2.03
VPS13AQ96RL7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13AQ96RL7 MTND5P19-201ENST00000424872 1794 ntBASIC2.36□□□□□ -2.03
VPS13AQ96RL7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 Z73965.1-201ENST00000623412 2297 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC000123.3-201ENST00000624029 4975 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC107081.1-201ENST00000414975 361 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC118282.1-201ENST00000506408 765 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC092436.3-201ENST00000511788 257 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AK6P1-201ENST00000540219 478 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 RHEBP3-201ENST00000411920 351 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC087385.1-201ENST00000475062 312 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 RN7SL633P-201ENST00000488974 297 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 MIR449C-201ENST00000516047 92 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 RNA5SP281-201ENST00000516504 135 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 MIR2114-201ENST00000516645 80 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 OR8L1P-201ENST00000534005 955 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC008083.2-201ENST00000546707 476 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC128687.1-201ENST00000605304 619 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AP004247.3-201ENST00000608682 624 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 OR6C64P-201ENST00000419708 825 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 RPS26P30-201ENST00000443431 335 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AL592437.1-201ENST00000443781 492 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 RPS6P2-201ENST00000454208 705 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AP000790.1-201ENST00000528891 737 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AC061975.8-201ENST00000587058 721 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 AL360085.1-201ENST00000604713 532 ntBASIC2.35□□□□□ -2.03
VPS13AQ96RL7 MTND5P29-201ENST00000458676 1807 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13AQ96RL7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.34□□□□□ -2.03
VPS13AQ96RL7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13AQ96RL7 RPL31P12-201ENST00000422587 358 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 AP000893.1-201ENST00000474462 794 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 AC106872.2-201ENST00000494303 480 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS13AQ96RL7 AC011611.5-201ENST00000552477 578 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS13AQ96RL7 AC004925.1-201ENST00000624256 2706 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 SCN1A-220ENST00000641603 12506 ntBASIC2.34□□□□□ -2.03
VPS13AQ96RL7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13AQ96RL7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS13AQ96RL7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS13AQ96RL7 RPL21P3-201ENST00000395517 478 ntBASIC2.34□□□□□ -2.04
VPS13AQ96RL7 AL035551.1-201ENST00000446931 348 ntBASIC2.34□□□□□ -2.04
VPS13AQ96RL7 CEACAMP4-201ENST00000457676 421 ntBASIC2.34□□□□□ -2.04
VPS13AQ96RL7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
VPS13AQ96RL7 ACTR6P1-201ENST00000514311 1104 ntBASIC2.34□□□□□ -2.04
VPS13AQ96RL7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VPS13AQ96RL7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 RPL9P7-201ENST00000330965 580 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AC245166.1-201ENST00000521012 253 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 VDAC1P3-201ENST00000434069 851 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AC108078.2-201ENST00000510750 236 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AL365503.1-201ENST00000605247 905 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS13AQ96RL7 RN7SKP285-201ENST00000410137 318 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 RN7SKP43-201ENST00000516173 320 ntBASIC2.33□□□□□ -2.04
VPS13AQ96RL7 RNU6-295P-201ENST00000516901 104 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms