Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 NPM1P49-201ENST00000448027 714 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC104978.1-201ENST00000449387 391 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC073055.1-201ENST00000456901 1621 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 RPL21P104-201ENST00000464143 478 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 SETP6-201ENST00000479329 568 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 RPL21P13-201ENST00000488305 481 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL21A1Q96P44 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC026427.2-201ENST00000506228 536 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC104057.1-201ENST00000515547 497 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC012182.1-201ENST00000570133 895 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC124283.4-201ENST00000581815 456 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC012254.4-201ENST00000588843 273 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AL162713.1-201ENST00000604480 262 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 BNIP3P4-201ENST00000604946 565 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AL159169.3-201ENST00000608871 561 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC006023.2-201ENST00000609916 167 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC048347.1-201ENST00000624621 427 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AL355578.1-201ENST00000607405 1328 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC016716.1-201ENST00000265882 708 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 RNU6-792P-201ENST00000363490 107 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 RNU6-335P-201ENST00000364563 113 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 RNU6-609P-201ENST00000365459 107 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 RNU6-444P-201ENST00000383988 108 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 RNU6-1005P-201ENST00000384519 107 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 SNORA48.8-201ENST00000391324 134 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 TAF9BP1-201ENST00000396646 746 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 NDUFB4P4-201ENST00000404822 243 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 BOLA3P4-201ENST00000418151 400 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 MTCO1P43-201ENST00000431831 488 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 OR2B8P-201ENST00000432841 938 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 NEK4P1-201ENST00000433383 879 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 RPL32P34-201ENST00000486380 400 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 RPL7P38-201ENST00000488396 739 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 OR8K2P-201ENST00000524645 927 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 SNRPGP15-201ENST00000600149 222 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 AL355812.1-201ENST00000603215 216 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 YWHAQP7-201ENST00000603536 658 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC090425.2-201ENST00000608818 501 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 AL356118.1-201ENST00000635272 1078 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
COL21A1Q96P44 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 AC118273.1-201ENST00000525324 3006 ntBASIC3.05□□□□□ -1.92
COL21A1Q96P44 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL21A1Q96P44 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 ZNF37BP-203ENST00000452306 1352 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 DYNLT3P1-201ENST00000378574 347 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 MIR34B-201ENST00000385076 84 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 RNU6-837P-201ENST00000391056 108 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL21A1Q96P44 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 AC073264.1-201ENST00000411508 416 ntBASIC3.04□□□□□ -1.92
COL21A1Q96P44 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms