Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC012181.1-201ENST00000479895 423 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AC110794.1-201ENST00000505816 425 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AC024341.1-201ENST00000526444 1552 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 OR4H12P-201ENST00000556269 907 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 MIR2682-201ENST00000580305 110 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 OR4G1P-201ENST00000588632 938 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AL160281.1-201ENST00000605307 311 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 AC016877.3-201ENST00000606778 504 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 MIR8057-201ENST00000620957 69 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
C9orf72Q96LT7 MTND4P34-201ENST00000572715 1371 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.23□□□□□ -1.89
C9orf72Q96LT7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 RNA5SP27-201ENST00000363839 119 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 RNU6-1005P-201ENST00000384519 107 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 RNU6-272P-201ENST00000411028 104 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 HMGN1P24-201ENST00000412282 298 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC063979.1-201ENST00000415539 377 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC091390.3-201ENST00000426478 338 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 OR2AS1P-201ENST00000427827 319 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 PTP4A1P3-201ENST00000433661 420 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 VDAC1P3-201ENST00000434069 851 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC006028.1-201ENST00000438379 402 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC087879.1-201ENST00000474343 374 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 RPS27AP1-201ENST00000475545 471 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC103833.1-201ENST00000517442 172 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AF279873.1-201ENST00000523393 313 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 GTF2IP8-201ENST00000560687 584 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC012493.2-201ENST00000595083 291 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 IGHV3-29-201ENST00000604817 344 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AL109659.3-201ENST00000624985 950 ntBASIC3.22□□□□□ -1.89
C9orf72Q96LT7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf72Q96LT7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 SEC63P2-201ENST00000503863 1939 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RNU6-1339P-201ENST00000363574 91 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 UBE2V1P11-201ENST00000411559 285 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 Z75741.1-201ENST00000446793 314 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 DNAJC19P8-201ENST00000452887 259 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RPL7P5-201ENST00000471472 736 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RNU6-202P-201ENST00000515998 96 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 IGKV2D-36-201ENST00000518643 226 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL163153.1-201ENST00000554223 283 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 RPL21P12-201ENST00000559810 515 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 OR2BH1P-201ENST00000608850 864 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AP003400.6-201ENST00000624698 740 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AC092608.3-201ENST00000625017 386 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL356118.1-201ENST00000635272 1078 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 FRG1DP-201ENST00000635586 771 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 ZNF37BP-203ENST00000452306 1352 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 AL359893.1-201ENST00000447628 1580 ntBASIC3.21□□□□□ -1.9
C9orf72Q96LT7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf72Q96LT7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf72Q96LT7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf72Q96LT7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf72Q96LT7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
C9orf72Q96LT7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms