Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC006499.2-201ENST00000513470 337 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX27Q96L92 AC016065.2-201ENST00000514530 444 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX27Q96L92 RNU6-150P-201ENST00000516237 95 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 RNA5SP519-201ENST00000516480 119 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX27Q96L92 AL121766.1-201ENST00000547436 487 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 RPL21P7-201ENST00000557463 483 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX27Q96L92 AL133457.1-201ENST00000564251 987 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX27Q96L92 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX27Q96L92 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX27Q96L92 AC040904.1-201ENST00000590850 223 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 AL161729.3-201ENST00000603533 673 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 RNU6-88P-201ENST00000606801 100 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 FAM27D1-201ENST00000612308 341 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 AC091965.5-201ENST00000624785 342 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX27Q96L92 AC092192.1-201ENST00000633154 1018 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 AC127502.3-201ENST00000636170 1206 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
SNX27Q96L92 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX27Q96L92 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX27Q96L92 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX27Q96L92 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX27Q96L92 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SNX27Q96L92 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SNX27Q96L92 AC011978.2-201ENST00000569835 2054 ntBASIC4.66□□□□□ -1.66
SNX27Q96L92 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX27Q96L92 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX27Q96L92 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
SNX27Q96L92 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SNX27Q96L92 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX27Q96L92 NOL8P1-201ENST00000508336 3529 ntBASIC4.65□□□□□ -1.66
SNX27Q96L92 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX27Q96L92 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SNX27Q96L92 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX27Q96L92 Y_RNA.302-201ENST00000364997 102 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 RNA5SP88-201ENST00000365560 109 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX27Q96L92 Y_RNA.510-201ENST00000384511 114 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SNX27Q96L92 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX27Q96L92 RN7SKP182-201ENST00000410772 298 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX27Q96L92 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AC016907.1-201ENST00000419483 435 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AC008065.1-201ENST00000428525 348 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AC009961.3-201ENST00000449832 765 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 IFNWP4-201ENST00000453148 294 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX27Q96L92 RPL7P22-201ENST00000466005 733 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AL136126.1-201ENST00000473603 402 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AC087385.1-201ENST00000475062 312 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX27Q96L92 PGBD4P4-201ENST00000509673 613 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AC074250.1-201ENST00000511117 192 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX27Q96L92 AC008802.1-201ENST00000519121 791 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 TVP23BP1-201ENST00000557500 617 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX27Q96L92 RN7SL703P-201ENST00000578485 302 ntBASIC4.65□□□□□ -1.67
SNX27Q96L92 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX27Q96L92 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX27Q96L92 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX27Q96L92 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX27Q96L92 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SNX27Q96L92 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SNX27Q96L92 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SNX27Q96L92 AP002907.1-201ENST00000606361 1430 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
SNX27Q96L92 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX27Q96L92 AC130650.2-201ENST00000618736 2403 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX27Q96L92 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX27Q96L92 LINC00561-201ENST00000565815 2738 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX27Q96L92 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX27Q96L92 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
SNX27Q96L92 MIR195-201ENST00000385194 87 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 U3.26-201ENST00000391236 204 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 AL121972.1-201ENST00000402023 252 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX27Q96L92 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX27Q96L92 AC004448.2-201ENST00000422360 586 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 RPL23AP38-201ENST00000423801 469 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX27Q96L92 AC098826.1-201ENST00000433943 471 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX27Q96L92 EEF1E1P1-201ENST00000446998 430 ntBASIC4.64□□□□□ -1.67
SNX27Q96L92 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX27Q96L92 RPS27AP13-201ENST00000498403 237 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms