Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.16□□□□□ -1.42
CALR3Q96L12 AP000620.1-201ENST00000527147 504 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.16□□□□□ -1.42
CALR3Q96L12 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.16□□□□□ -1.42
CALR3Q96L12 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.16□□□□□ -1.42
CALR3Q96L12 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
CALR3Q96L12 AC068446.3-201ENST00000555285 382 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.16□□□□□ -1.42
CALR3Q96L12 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.16□□□□□ -1.42
CALR3Q96L12 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.16□□□□□ -1.42
CALR3Q96L12 MIR4790-201ENST00000577799 79 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 SNRPGP17-201ENST00000603780 214 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 AL138889.2-201ENST00000603883 242 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 AP000942.4-201ENST00000604811 241 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 AL670379.4-201ENST00000605279 254 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.16□□□□□ -1.42
CALR3Q96L12 AL450472.3-201ENST00000615578 367 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.16□□□□□ -1.42
CALR3Q96L12 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CALR3Q96L12 AC005005.4-201ENST00000623789 16698 ntBASIC6.16□□□□□ -1.42
CALR3Q96L12 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.16□□□□□ -1.42
CALR3Q96L12 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CALR3Q96L12 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CALR3Q96L12 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.16□□□□□ -1.42
CALR3Q96L12 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.16□□□□□ -1.42
CALR3Q96L12 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CALR3Q96L12 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
CALR3Q96L12 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.16□□□□□ -1.42
CALR3Q96L12 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CALR3Q96L12 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CALR3Q96L12 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.15□□□□□ -1.42
CALR3Q96L12 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CALR3Q96L12 AC073136.1-201ENST00000449426 2884 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CALR3Q96L12 Y_RNA.202-201ENST00000364083 110 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 SNORA23-201ENST00000365128 182 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.15□□□□□ -1.42
CALR3Q96L12 RNU6-738P-201ENST00000384531 106 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 RNU6-837P-201ENST00000391056 108 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 SNORA75.4-201ENST00000391278 119 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AC110754.1-201ENST00000399740 601 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 NDUFS5P1-201ENST00000405668 289 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 RPL5P18-201ENST00000406671 891 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 THEM7P-201ENST00000419556 672 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.15□□□□□ -1.42
CALR3Q96L12 AC005019.1-201ENST00000436455 431 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 PRPF38AP2-201ENST00000438179 851 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AL121871.1-201ENST00000443413 436 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CALR3Q96L12 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.15□□□□□ -1.42
CALR3Q96L12 PTMAP3-201ENST00000447474 330 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 FABP5P13-201ENST00000452144 328 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.15□□□□□ -1.42
CALR3Q96L12 AC004129.2-201ENST00000457229 287 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 RNU7-152P-201ENST00000458982 64 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 RN7SL254P-201ENST00000460609 284 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.15□□□□□ -1.42
CALR3Q96L12 RPL7P43-201ENST00000478876 753 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.15□□□□□ -1.42
CALR3Q96L12 IGBP1P4-201ENST00000503202 879 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AC010350.1-201ENST00000504908 231 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 HIGD1AP13-201ENST00000509878 289 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.15□□□□□ -1.42
CALR3Q96L12 RNA5SP454-201ENST00000517231 127 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 ELOCP31-201ENST00000540463 467 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.15□□□□□ -1.42
CALR3Q96L12 MIR3672-201ENST00000584290 82 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 AL080274.1-201ENST00000605565 220 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 MIR4275-201ENST00000636486 87 ntBASIC6.15□□□□□ -1.42
CALR3Q96L12 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CALR3Q96L12 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CALR3Q96L12 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CALR3Q96L12 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CALR3Q96L12 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
CALR3Q96L12 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CALR3Q96L12 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.14□□□□□ -1.43
CALR3Q96L12 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CALR3Q96L12 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.14□□□□□ -1.43
CALR3Q96L12 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CALR3Q96L12 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CALR3Q96L12 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CALR3Q96L12 RNU6-254P-201ENST00000363377 107 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 Y_RNA.212-201ENST00000364177 102 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 MTCYBP4-201ENST00000401524 249 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.14□□□□□ -1.43
CALR3Q96L12 RPL7P10-201ENST00000417407 739 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 HMGB3P24-201ENST00000433260 622 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 AL589765.3-201ENST00000446084 462 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.14□□□□□ -1.43
CALR3Q96L12 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.14□□□□□ -1.43
CALR3Q96L12 GEMIN2P1-201ENST00000454246 752 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.14□□□□□ -1.43
CALR3Q96L12 AC090096.1-201ENST00000489168 390 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 AL671862.1-201ENST00000515851 349 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 RN7SKP24-201ENST00000515888 284 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 RNA5SP96-201ENST00000516041 107 ntBASIC6.14□□□□□ -1.43
CALR3Q96L12 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CALR3Q96L12 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.14□□□□□ -1.43
CALR3Q96L12 AC135001.1-201ENST00000544546 283 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms