Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 Y_RNA.120-201ENST00000363304 110 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 RNU6-647P-201ENST00000364243 107 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 Y_RNA.221-201ENST00000364248 96 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 MIR488-201ENST00000365739 83 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 RNU6-1310P-201ENST00000384153 107 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 MIRLET7F2-201ENST00000385277 83 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 RNA5SP225-201ENST00000410874 135 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC138623.1-201ENST00000418060 216 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 CYP2C56P-201ENST00000440076 291 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC018630.3-201ENST00000542637 96 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC090022.1-201ENST00000546569 311 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC091178.2-201ENST00000584401 117 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC009955.2-201ENST00000597288 542 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC010999.1-201ENST00000611856 324 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 AC010329.5-201ENST00000623497 2174 ntBASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 U3.1-201ENST00000362500 215 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 SNORD115-8-201ENST00000363856 82 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 Y_RNA.220-201ENST00000364244 109 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 SNORD115-38-201ENST00000365037 82 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AL606845.1-201ENST00000404881 255 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 RPSAP72-201ENST00000407020 358 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 U6atac.2-201ENST00000408644 118 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 RNU2-43P-201ENST00000410306 190 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AL662791.3-201ENST00000413771 776 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC009963.1-201ENST00000417265 157 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 DDX11L10-201ENST00000430178 571 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC099344.1-201ENST00000433548 492 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AP000936.3-201ENST00000438127 255 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 PTMAP1-205ENST00000455552 325 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC096922.1-201ENST00000461635 651 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 RPS26P45-201ENST00000471748 340 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 RNU6-561P-201ENST00000516222 102 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 COX4I1P1-201ENST00000554239 509 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC016629.2-201ENST00000597341 199 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC099667.1-201ENST00000624222 469 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AC016582.3-206ENST00000636547 207 ntBASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.66□□□□□ -1.34
MS4A3Q96HJ5 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms