Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC091046.2-201ENST00000620775 665 ntBASIC2.51□□□□□ -2.01
TTC28Q96AY4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TTC28Q96AY4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 RNU1-35P-201ENST00000362782 153 ntBASIC2.51□□□□□ -2.01
TTC28Q96AY4 POLR2J4-204ENST00000418424 324 ntBASIC2.51□□□□□ -2.01
TTC28Q96AY4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.51□□□□□ -2.01
TTC28Q96AY4 MIR6845-201ENST00000613182 61 ntBASIC2.51□□□□□ -2.01
TTC28Q96AY4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TTC28Q96AY4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.5□□□□□ -2.01
TTC28Q96AY4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.5□□□□□ -2.01
TTC28Q96AY4 RPL23AP49-201ENST00000492925 468 ntBASIC2.5□□□□□ -2.01
TTC28Q96AY4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.5□□□□□ -2.01
TTC28Q96AY4 AC103710.2-201ENST00000609912 942 ntBASIC2.5□□□□□ -2.01
TTC28Q96AY4 AC006111.3-201ENST00000622137 383 ntBASIC2.5□□□□□ -2.01
TTC28Q96AY4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TTC28Q96AY4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TTC28Q96AY4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TTC28Q96AY4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.5□□□□□ -2.01
TTC28Q96AY4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.5□□□□□ -2.01
TTC28Q96AY4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TTC28Q96AY4 AL049840.6-202ENST00000603373 279 ntBASIC2.5□□□□□ -2.01
TTC28Q96AY4 AC025125.1-201ENST00000624743 1922 ntBASIC2.5□□□□□ -2.01
TTC28Q96AY4 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
TTC28Q96AY4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
TTC28Q96AY4 RNU6-457P-201ENST00000363999 107 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 MTCO3P20-201ENST00000454926 688 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 ASNSP4-201ENST00000511103 447 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 RAC1P5-201ENST00000512182 576 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 RNA5SP217-201ENST00000515959 91 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 SNRPGP18-201ENST00000553000 214 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.49□□□□□ -2.01
TTC28Q96AY4 AC010620.2-201ENST00000600135 313 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.49□□□□□ -2.01
TTC28Q96AY4 YWHAEP7-203ENST00000622054 312 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 OR1S1-201ENST00000624470 978 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
TTC28Q96AY4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
TTC28Q96AY4 Z73965.1-201ENST00000623412 2297 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 RPL23AP45-201ENST00000476406 468 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 SNORA31.1-201ENST00000515993 133 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 SNORA31.5-201ENST00000516190 133 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.49□□□□□ -2.01
TTC28Q96AY4 RPL23AP84-201ENST00000571193 464 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 AC090115.4-201ENST00000609970 188 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 AC015813.4-201ENST00000610469 179 ntBASIC2.49□□□□□ -2.01
TTC28Q96AY4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.49□□□□□ -2.01
TTC28Q96AY4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TTC28Q96AY4 OR52B1P-201ENST00000316506 909 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 RNY1-201ENST00000364228 113 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 RNU4-62P-201ENST00000410125 130 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC004987.3-201ENST00000413879 771 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC107398.1-201ENST00000486904 505 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC135721.1-201ENST00000497954 479 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC025445.1-201ENST00000502728 300 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC128657.1-201ENST00000549459 145 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TTC28Q96AY4 Y_RNA.224-201ENST00000364308 111 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 ISCA1P2-201ENST00000438679 421 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.48□□□□□ -2.01
TTC28Q96AY4 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
TTC28Q96AY4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 HMGB1P10-201ENST00000395823 563 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 CACYBPP2-201ENST00000453625 678 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 AC002984.1-201ENST00000591692 448 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TTC28Q96AY4 AC005261.6-201ENST00000623072 1387 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TTC28Q96AY4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 AL450263.2-201ENST00000439400 589 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 RPS6P2-201ENST00000454208 705 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 RPL36AP51-201ENST00000487216 318 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 AC104090.1-201ENST00000506341 1171 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 RNA5SP154-201ENST00000516193 111 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms