Protein–RNA interactions for Protein: Q969Q1

TRIM63, E3 ubiquitin-protein ligase TRIM63, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM63Q969Q1 AC123904.2-201ENST00000548059 300 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC126177.5-201ENST00000549599 178 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AL133153.1-201ENST00000557756 303 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC093249.4-201ENST00000564755 259 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC010547.6-201ENST00000571789 193 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 MIR3154-201ENST00000577829 84 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 ARGFXP2-201ENST00000579304 949 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 TPMTP1-201ENST00000592307 737 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AF131215.7-201ENST00000602443 707 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC012065.4-201ENST00000602445 679 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC105254.2-201ENST00000603636 436 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AL031666.3-201ENST00000609320 1006 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AL591926.8-201ENST00000616876 211 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AL159972.1-201ENST00000625150 448 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM63Q969Q1 AC092326.2-201ENST00000624772 1561 ntBASIC4.06□□□□□ -1.76
TRIM63Q969Q1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC109780.1-201ENST00000451768 1344 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 RNU1-77P-201ENST00000390868 162 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AL591034.1-201ENST00000407447 340 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 RPL23AP26-201ENST00000412728 464 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 UBTFL3-201ENST00000418934 1024 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 CYCSP46-201ENST00000423569 204 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 MED14P1-201ENST00000430517 648 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 OR7E125P-201ENST00000443450 846 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 COX6CP12-201ENST00000446748 202 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 KF459542.1-201ENST00000450908 553 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC092754.2-201ENST00000463506 460 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 RPL31P60-201ENST00000478450 367 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AP000797.1-201ENST00000478870 387 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 HSPE1P6-201ENST00000479457 291 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AP000907.2-201ENST00000530827 353 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AL391156.1-201ENST00000554965 554 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC048341.3-201ENST00000619323 491 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 MAPK10-253ENST00000641010 4072 ntBASIC4.05□□□□□ -1.76
TRIM63Q969Q1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM63Q969Q1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 DEFB108F-201ENST00000344638 222 ntBASIC4.04□□□□□ -1.76
TRIM63Q969Q1 SNORA23-201ENST00000365128 182 ntBASIC4.04□□□□□ -1.76
TRIM63Q969Q1 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 RNU6-533P-201ENST00000384144 107 ntBASIC4.04□□□□□ -1.76
TRIM63Q969Q1 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
TRIM63Q969Q1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM63Q969Q1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms