Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AP002001.2-201ENST00000529025 1469 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 RN7SKP100-201ENST00000411258 284 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 MTCO1P17-201ENST00000411522 491 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC022028.1-201ENST00000412054 408 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 BX510359.2-201ENST00000417920 305 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 OR2B7P-201ENST00000429302 934 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 UBE2V1P8-201ENST00000437166 265 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 MTND6P13-201ENST00000443510 523 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AP000542.1-201ENST00000448473 371 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL451050.1-201ENST00000450126 415 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC003071.1-201ENST00000451219 789 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 Z82190.1-201ENST00000454534 490 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 MTCO1P42-201ENST00000457379 726 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 RPL35AP28-201ENST00000459730 331 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC083829.1-201ENST00000503756 657 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 MTCO2P4-201ENST00000517968 247 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AP003467.2-201ENST00000520175 319 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC090281.1-201ENST00000523019 276 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL133241.1-201ENST00000556832 487 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 TPMTP1-201ENST00000592307 737 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL606834.2-201ENST00000602954 668 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL161729.4-201ENST00000604650 476 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC022306.2-201ENST00000617563 647 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AC091953.3-201ENST00000623220 236 ntBASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCHCR1Q8TD31 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AL122126.1-201ENST00000546905 1318 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 ERCC6-202ENST00000374127 1782 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 SNORD74.4-201ENST00000364129 80 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 RNA5SP22-201ENST00000365393 109 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 RNA5SP87-201ENST00000384155 118 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 MIR181A1-201ENST00000385026 110 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 MIR298-201ENST00000401212 88 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 Y_RNA.604-201ENST00000410574 102 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 NUP35P2-201ENST00000416748 943 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 MTCO2P5-201ENST00000422621 426 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AL360081.1-201ENST00000428299 555 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 NANOGP6-201ENST00000429190 847 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 USP9YP9-201ENST00000429406 715 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC016831.4-201ENST00000438302 307 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 MTND4P18-201ENST00000447010 465 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 SCARNA10-201ENST00000459255 330 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AL136126.1-201ENST00000473603 402 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC010683.1-201ENST00000473673 378 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC104563.1-201ENST00000476147 376 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC008897.1-201ENST00000494006 347 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 SCARNA22-201ENST00000503991 125 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC006499.6-201ENST00000511169 607 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 RNU6-430P-201ENST00000517078 107 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 IGKV1-32-201ENST00000519290 311 ntBASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.76□□□□□ -1.65
CCHCR1Q8TD31 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms