Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL049779.2-201ENST00000553847 315 ntBASIC6.24□□□□□ -1.41
RNF135Q8IUD6 AL049872.1-201ENST00000556323 322 ntBASIC6.24□□□□□ -1.41
RNF135Q8IUD6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF135Q8IUD6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC009229.4-201ENST00000623854 1947 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC110373.1-201ENST00000505994 3505 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 RNU6-960P-201ENST00000364056 120 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 SNORA56-201ENST00000383966 129 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 MIR550A3-201ENST00000390735 95 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC007562.1-201ENST00000421819 517 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC099336.2-201ENST00000422457 254 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AL590762.4-201ENST00000425885 253 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AL139148.1-201ENST00000427122 680 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC005094.1-201ENST00000440420 368 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC112187.1-201ENST00000455837 479 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC099560.2-201ENST00000457554 255 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 PPIAP21-201ENST00000464473 501 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 RN7SL808P-201ENST00000496066 299 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC008526.1-201ENST00000509149 338 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 FTH1P9-201ENST00000513251 355 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 RNU6-789P-201ENST00000517105 102 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 RPA2P3-201ENST00000533268 770 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 MIR4293-201ENST00000584305 78 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 MIR6820-201ENST00000611508 62 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 DUSP12P1-201ENST00000612874 516 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AL021918.2-201ENST00000613415 194 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC137590.2-201ENST00000619709 240 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 KPNA2P1-201ENST00000458289 1591 ntBASIC6.23□□□□□ -1.41
RNF135Q8IUD6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF135Q8IUD6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 Y_RNA.556-201ENST00000384677 113 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 MIR223-201ENST00000385204 110 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RNU6-550P-201ENST00000391057 101 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 U3.29-201ENST00000391296 212 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 AC016739.1-201ENST00000405359 345 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RNU2-64P-201ENST00000411315 191 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 GJA6P-201ENST00000415117 1042 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RPS15AP40-201ENST00000419621 391 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 PDSS1P1-201ENST00000422953 1114 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 SNAP23P1-201ENST00000433229 246 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RPL21P23-201ENST00000446654 460 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 SCARNA18-201ENST00000459004 134 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RN7SL72P-201ENST00000460697 269 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 RPL21P8-201ENST00000465083 535 ntBASIC6.22□□□□□ -1.41
RNF135Q8IUD6 AC058823.1-201ENST00000485315 474 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms