Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AL590233.1-201ENST00000430017 456 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 RPL23AP74-201ENST00000437246 471 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 HMGB1P37-201ENST00000439613 609 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AL500522.2-201ENST00000448562 343 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 TRGVB-201ENST00000453257 471 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 SBDSP1-204ENST00000453858 737 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 DNAJC19P1-201ENST00000455312 319 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 SUMO2P2-201ENST00000456482 255 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AP001992.1-205ENST00000462248 379 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 RPS27P29-201ENST00000463110 252 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC104472.2-201ENST00000469035 601 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC105137.1-201ENST00000484355 562 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC091167.1-201ENST00000492017 396 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC069306.1-201ENST00000507006 843 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 RN7SKP31-201ENST00000516354 278 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AP001207.2-201ENST00000519490 539 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 MTND1P6-201ENST00000523621 946 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC008011.1-201ENST00000545989 227 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC091516.1-201ENST00000549191 703 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 CR383656.6-201ENST00000550518 394 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 GTF2IP8-201ENST00000560687 584 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC126365.2-201ENST00000580630 379 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC104785.1-201ENST00000603220 588 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 MIR6076-201ENST00000617521 113 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 AC011944.2-201ENST00000624440 683 ntBASIC2.53□□□□□ -2
MRPL55Q7Z7F7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
MRPL55Q7Z7F7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.53□□□□□ -2.01
MRPL55Q7Z7F7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 NCAPGP1-201ENST00000505112 1814 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 RN7SKP280-201ENST00000364196 304 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 OR6K3-202ENST00000368146 996 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 U3.22-201ENST00000391120 215 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC096533.1-201ENST00000411645 353 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AL592310.1-201ENST00000414330 671 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 MUPP-201ENST00000438111 566 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 RPL21P11-201ENST00000461458 483 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 RPS4XP10-201ENST00000465034 731 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 ST13P14-201ENST00000474095 734 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 RPS23P1-201ENST00000491662 432 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 CAB39P1-201ENST00000502277 460 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 TMEM251P1-201ENST00000503717 318 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC111000.2-201ENST00000507775 550 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC109464.2-201ENST00000510242 943 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC024224.1-201ENST00000538284 609 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 HSPE1P3-201ENST00000559254 309 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 OR4K8P-201ENST00000578842 1048 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 MIR4284-201ENST00000578924 81 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC053481.4-201ENST00000583164 216 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC006116.5-201ENST00000591936 559 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC068620.3-201ENST00000602749 560 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AL035411.2-201ENST00000604022 421 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 ARF4P1-201ENST00000605447 541 ntBASIC2.52□□□□□ -2.01
MRPL55Q7Z7F7 AC005332.6-201ENST00000613178 446 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms