Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 BNIP3P22-201ENST00000593399 556 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AC096553.1-201ENST00000605169 829 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 MIR6868-201ENST00000611215 58 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AC091304.9-201ENST00000612091 226 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 7SK.10-201ENST00000621414 298 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 YWHAEP7-203ENST00000622054 312 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AC109454.4-201ENST00000623411 649 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AP003122.6-201ENST00000623831 495 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AC009033.1-201ENST00000624279 431 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 AP000542.2-201ENST00000623199 6179 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BHLHA9Q7RTU4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AL157777.2-201ENST00000258070 137 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 RNU1-108P-201ENST00000362556 161 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 Y_RNA.160-201ENST00000363677 92 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 RNA5SP513-201ENST00000364648 118 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 RNU6-1200P-201ENST00000384162 107 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 VN1R42P-201ENST00000424651 344 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AL354941.1-201ENST00000438600 464 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AL512286.1-201ENST00000439244 400 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC006326.1-201ENST00000445465 787 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 RPS11P1-201ENST00000451072 473 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 MTND5P16-201ENST00000460269 1703 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 RPL38P1-201ENST00000460914 211 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC037198.2-201ENST00000478845 733 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 VPS26AP1-201ENST00000483197 979 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC025554.1-201ENST00000505641 188 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 FGF7P4-201ENST00000509595 295 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC023632.1-201ENST00000518463 375 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AP002453.2-201ENST00000533503 320 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 ISCA1P3-201ENST00000577104 373 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC022662.1-201ENST00000580252 331 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC110743.1-201ENST00000584870 478 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC060780.3-201ENST00000589464 80 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC055839.1-201ENST00000634467 498 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 MFSD8-245ENST00000641743 948 ntBASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.25□□□□□ -1.73
BHLHA9Q7RTU4 AC139713.2-215ENST00000641428 5037 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 AC083843.3-201ENST00000623679 2186 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 AC107982.1-201ENST00000507171 1300 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 Y_RNA.58-201ENST00000362807 102 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 RNU5B-1-201ENST00000363286 116 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 Y_RNA.154-201ENST00000363624 102 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 RNY3P1-201ENST00000365085 102 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 RNY3-201ENST00000365484 102 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 Y_RNA.453-201ENST00000384223 109 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 Y_RNA.490-201ENST00000384413 102 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 RNU4-70P-201ENST00000384579 139 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 RNU4-74P-201ENST00000411280 161 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 TPMTP3-201ENST00000411928 735 ntBASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.24□□□□□ -1.73
BHLHA9Q7RTU4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms