Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.97□□□□□ -2.09
VPS13CQ709C8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.09
VPS13CQ709C8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13CQ709C8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC018630.1-201ENST00000541376 925 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC011611.5-201ENST00000552477 578 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13CQ709C8 RN7SKP285-201ENST00000410137 318 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 AL445646.1-201ENST00000431784 216 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC020895.1-201ENST00000595362 272 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC011494.1-201ENST00000596454 237 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC068313.1-201ENST00000604028 1008 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 Z73965.1-201ENST00000623412 2297 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VPS13CQ709C8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC103968.1-201ENST00000557841 573 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC004825.2-201ENST00000616634 455 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 MIR1291-201ENST00000627649 87 ntBASIC1.96□□□□□ -2.1
VPS13CQ709C8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AL512646.1-201ENST00000269395 1077 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 RNU6-661P-201ENST00000362409 107 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 RNU6-14P-201ENST00000384630 106 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 MIR518E-201ENST00000385252 88 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 RNA5SP274-201ENST00000410484 108 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 MRPL50P4-201ENST00000446432 475 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC128687.1-201ENST00000605304 619 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13CQ709C8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13CQ709C8 SNORA26.9-201ENST00000391322 122 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 BTG3P1-201ENST00000435859 716 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 MTCO3P20-201ENST00000454926 688 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 RNA5SP480-201ENST00000516840 109 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC074029.1-201ENST00000552531 1044 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13CQ709C8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13CQ709C8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AL353743.4-201ENST00000422653 1547 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS13CQ709C8 NPM1P10-201ENST00000398310 865 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 NDUFA5P4-201ENST00000436704 385 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 AP001086.1-201ENST00000494882 321 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 ACTR6P1-201ENST00000514311 1104 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS13CQ709C8 CR589904.2-201ENST00000612533 440 ntBASIC1.95□□□□□ -2.1
VPS13CQ709C8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13CQ709C8 AC008432.1-201ENST00000615912 1320 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13CQ709C8 RN7SKP140-201ENST00000411196 284 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 MTCO3P11-201ENST00000455103 774 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 VN1R17P-201ENST00000472048 1090 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 RPP40P2-201ENST00000603596 712 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS13CQ709C8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 KCTD9P5-201ENST00000504141 1170 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 AK6P1-201ENST00000540219 478 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 SNRPGP18-201ENST00000553000 214 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 AC026464.5-201ENST00000562497 722 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 AC061975.8-201ENST00000587058 721 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 U7.8-201ENST00000619968 63 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 AP1B1P2-201ENST00000416196 106 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 MTCO3P21-201ENST00000430791 643 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 TRBV26-201ENST00000456572 344 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS13CQ709C8 AP000857.1-201ENST00000532151 543 ntBASIC1.94□□□□□ -2.1
VPS13CQ709C8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13CQ709C8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 GSTA9P-201ENST00000406231 611 ntBASIC1.93□□□□□ -2.1
VPS13CQ709C8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS13CQ709C8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms