Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 EXTL2P1-201ENST00000446218 416 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 SEPT7P6-201ENST00000469999 1143 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 TXNP6-201ENST00000510190 310 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 AC107222.1-201ENST00000510899 637 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 CKS1BP7-201ENST00000522230 235 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 NPM1P35-201ENST00000533043 868 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 MIR5092-201ENST00000583139 88 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.03□□□□□ -1.93
UBR3Q6ZT12 MIR6873-201ENST00000622788 63 ntBASIC3.03□□□□□ -1.93
UBR3Q6ZT12 AC002543.1-201ENST00000299783 1954 ntBASIC3.02□□□□□ -1.93
UBR3Q6ZT12 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
UBR3Q6ZT12 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 Z98742.2-201ENST00000431564 187 ntBASIC3.02□□□□□ -1.93
UBR3Q6ZT12 RPS6P12-201ENST00000432491 726 ntBASIC3.02□□□□□ -1.93
UBR3Q6ZT12 BTG3P1-201ENST00000435859 716 ntBASIC3.02□□□□□ -1.93
UBR3Q6ZT12 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 HMGB3P26-201ENST00000560051 582 ntBASIC3.02□□□□□ -1.93
UBR3Q6ZT12 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UBR3Q6ZT12 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC091564.4-201ENST00000533934 2194 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC013410.1-201ENST00000436223 1232 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 RPS27AP9-201ENST00000477681 438 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC106872.3-201ENST00000495104 446 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC112673.1-201ENST00000513168 575 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AL161781.1-201ENST00000354277 403 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 RNU7-170P-201ENST00000459303 61 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 RPL23AP14-201ENST00000468281 468 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 VN1R17P-201ENST00000472048 1090 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC103710.2-201ENST00000609912 942 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 AC092184.1-201ENST00000625042 715 ntBASIC3.01□□□□□ -1.93
UBR3Q6ZT12 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBR3Q6ZT12 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
UBR3Q6ZT12 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3□□□□□ -1.93
UBR3Q6ZT12 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3□□□□□ -1.93
UBR3Q6ZT12 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
UBR3Q6ZT12 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
UBR3Q6ZT12 GTF2H2B-203ENST00000508065 1432 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AC013470.3-201ENST00000420252 1194 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3□□□□□ -1.93
UBR3Q6ZT12 RPL23AP49-201ENST00000492925 468 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 CKS1BP2-201ENST00000497342 240 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3□□□□□ -1.93
UBR3Q6ZT12 RPS27AP18-201ENST00000515536 459 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AP000857.1-201ENST00000532151 543 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AC018630.1-201ENST00000541376 925 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AC091515.1-201ENST00000548110 679 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AC008126.1-201ENST00000549019 480 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 AADACP1-206ENST00000561502 1193 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 MIR6845-201ENST00000613182 61 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 Z99129.2-201ENST00000619967 314 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 TMEM161BP1-201ENST00000457388 1457 ntBASIC3□□□□□ -1.93
UBR3Q6ZT12 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3□□□□□ -1.93
UBR3Q6ZT12 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UBR3Q6ZT12 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBR3Q6ZT12 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.99□□□□□ -1.93
UBR3Q6ZT12 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
UBR3Q6ZT12 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
UBR3Q6ZT12 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.99□□□□□ -1.93
UBR3Q6ZT12 RPS20P25-201ENST00000412447 352 ntBASIC2.99□□□□□ -1.93
UBR3Q6ZT12 RANP7-201ENST00000418085 644 ntBASIC2.99□□□□□ -1.93
UBR3Q6ZT12 RPL31P45-201ENST00000419532 356 ntBASIC2.99□□□□□ -1.93
UBR3Q6ZT12 AC018634.1-201ENST00000437554 401 ntBASIC2.99□□□□□ -1.93
UBR3Q6ZT12 AC104090.1-201ENST00000506341 1171 ntBASIC2.99□□□□□ -1.93
UBR3Q6ZT12 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.99□□□□□ -1.93
UBR3Q6ZT12 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.99□□□□□ -1.93
UBR3Q6ZT12 MIR1291-201ENST00000627649 87 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms