Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 SMG1P6-201ENST00000532337 2930 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC134882.1-201ENST00000603738 1676 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RNU6-777P-201ENST00000364265 104 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RNU6-1322P-201ENST00000364309 107 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RNU6-1160P-201ENST00000384546 104 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RNU11-201ENST00000387069 134 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AL354719.1-201ENST00000406535 843 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RPS7P15-201ENST00000415804 584 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RPL7P57-201ENST00000423238 740 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC133104.1-201ENST00000429100 218 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 LSM1P1-201ENST00000438629 273 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RPL23AP16-201ENST00000441715 421 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC010618.1-201ENST00000469924 477 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC006511.1-201ENST00000470614 315 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC103851.1-201ENST00000506833 274 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC006390.1-201ENST00000508068 283 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 POU5F1P7-201ENST00000508759 541 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC093809.1-201ENST00000509155 340 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RNU7-30P-201ENST00000516835 62 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 RN7SKP116-201ENST00000516902 319 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 SNORA48.10-201ENST00000516965 160 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC134698.5-201ENST00000519444 336 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC006504.6-201ENST00000590142 199 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AL360012.1-201ENST00000602813 131 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 BCRP9-201ENST00000605312 388 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AC116447.1-201ENST00000613153 453 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AL713922.2-201ENST00000619384 716 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 TPTEP1-208ENST00000636884 213 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.22□□□□□ -1.57
CNKSR3Q6P9H4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.21□□□□□ -1.57
CNKSR3Q6P9H4 NMD3P1-201ENST00000439704 1488 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 GNG5P1-201ENST00000255500 204 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 OR11H4-201ENST00000315409 1082 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 Y_RNA.157-201ENST00000363638 102 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 U3.32-201ENST00000408116 212 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 RN7SKP267-201ENST00000410381 285 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 RN7SKP27-201ENST00000410684 333 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC073136.2-201ENST00000417282 849 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AL645608.4-201ENST00000423619 154 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 SKP1P1-201ENST00000438081 489 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 CBWD4P-201ENST00000445695 655 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 TRGVB-201ENST00000453257 471 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 MTCO1P42-201ENST00000457379 726 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 MEMO1P3-201ENST00000459811 302 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC011276.1-201ENST00000469688 323 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC109327.1-201ENST00000471666 403 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 RPS27P23-201ENST00000487608 251 ntBASIC5.21□□□□□ -1.58
CNKSR3Q6P9H4 AC112204.1-201ENST00000502591 103 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms