Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SNORD116-4-201ENST00000384733 96 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AL136372.1-201ENST00000403060 228 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 SNORA77-201ENST00000408716 125 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 CCDC58P2-201ENST00000417131 366 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 MTCO2P34-201ENST00000421994 607 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 BX323845.1-201ENST00000432417 179 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 RPL7P11-201ENST00000437586 658 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 PRPF38AP2-201ENST00000438179 851 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 RPL12P3-201ENST00000440080 396 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC112653.1-201ENST00000443851 386 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 UBDP1-202ENST00000457888 382 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 RN7SL244P-201ENST00000493405 297 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC104164.2-201ENST00000496953 495 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AL139099.1-201ENST00000497398 403 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 MLLT10P2-201ENST00000506434 249 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 RNA5SP73-201ENST00000516744 108 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AP002963.1-201ENST00000530590 184 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 ZNF519P3-201ENST00000557158 1032 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC093799.2-201ENST00000610062 578 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC138749.5-201ENST00000611461 208 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 MIR7155-201ENST00000615925 56 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC116165.2-201ENST00000616705 206 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC092140.2-201ENST00000618027 521 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC012150.2-201ENST00000621300 544 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 AC099654.13-201ENST00000639774 207 ntBASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PPP4R4Q6NUP7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC131971.1-201ENST00000332881 1482 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RNA5SP305-201ENST00000362665 119 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RN7SKP103-201ENST00000363848 320 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 Y_RNA.194-201ENST00000363985 102 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RNU4-75P-201ENST00000364621 146 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 U3.20-201ENST00000390909 217 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AL645927.1-201ENST00000396783 406 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 MIR921-201ENST00000401133 56 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RPS20P2-201ENST00000402520 389 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RNU2-43P-201ENST00000410306 190 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 SSXP9-201ENST00000417503 292 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 DLGAP5P1-201ENST00000430307 464 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AL121871.1-201ENST00000443413 436 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RN7SL41P-201ENST00000476144 297 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC083982.1-201ENST00000485679 344 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 OR51K1P-201ENST00000510214 950 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 Y_RNA.655-201ENST00000515919 96 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 RN7SKP289-201ENST00000517244 295 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 MTND4LP18-201ENST00000526864 291 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 SNRPGP16-201ENST00000533275 226 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AP000873.5-201ENST00000533906 236 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 SETP2-201ENST00000553886 926 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC015813.4-201ENST00000610469 179 ntBASIC4.57□□□□□ -1.68
PPP4R4Q6NUP7 AC010678.1-201ENST00000614118 713 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms