Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC000111.3-201ENST00000433478 193 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 HMGB1P31-201ENST00000437242 427 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AL662791.1-201ENST00000441992 928 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT40Q6A162 Z99127.3-201ENST00000448158 395 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AL033528.1-201ENST00000453780 140 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AL133244.1-201ENST00000456007 258 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RPL35AP15-201ENST00000468042 339 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT40Q6A162 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AF131216.2-201ENST00000512316 564 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 RNU6-202P-201ENST00000515998 96 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RNA5SP315-201ENST00000516340 116 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 RNA5SP312-201ENST00000517068 116 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AL121579.1-201ENST00000555129 305 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AL161729.4-201ENST00000604650 476 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC093591.3-201ENST00000634516 308 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.05□□□□□ -1.6
KRT40Q6A162 AC027228.2-201ENST00000567141 2154 ntBASIC5.05□□□□□ -1.6
KRT40Q6A162 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.05□□□□□ -1.6
KRT40Q6A162 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.05□□□□□ -1.6
KRT40Q6A162 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRT40Q6A162 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT40Q6A162 RLIMP2-201ENST00000427891 1563 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRT40Q6A162 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT40Q6A162 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRT40Q6A162 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRT40Q6A162 RNU6-777P-201ENST00000364265 104 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 RNU4-12P-201ENST00000365233 139 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 U8.14-201ENST00000390843 143 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRT40Q6A162 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT40Q6A162 RPS29P17-201ENST00000430795 166 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT40Q6A162 RPL37P21-201ENST00000435890 276 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 RPL31P58-201ENST00000469001 379 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC105137.1-201ENST00000484355 562 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AC074344.1-201ENST00000512823 224 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AP000790.1-201ENST00000528891 737 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 OR5BC1P-201ENST00000529327 739 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 CBX3P7-201ENST00000532876 502 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 ADI1P3-201ENST00000549509 470 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.04□□□□□ -1.6
KRT40Q6A162 MIR4444-1-201ENST00000581696 74 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 MIR4444-2-201ENST00000584390 74 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AP000860.1-201ENST00000605250 559 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AL591034.3-201ENST00000605511 685 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC025253.1-201ENST00000613623 543 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC231657.1-201ENST00000624313 397 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 MIR3688-2-201ENST00000636963 87 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 AC099654.14-201ENST00000638599 341 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRT40Q6A162 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AC021242.1-201ENST00000507315 2035 ntBASIC5.04□□□□□ -1.6
KRT40Q6A162 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.04□□□□□ -1.6
KRT40Q6A162 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 MIR331-201ENST00000362302 94 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 SNORD66.1-201ENST00000391230 76 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RPS26P8-201ENST00000393490 348 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 CIR1P3-201ENST00000405137 479 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 SNORA11.1-201ENST00000408133 129 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RNA5SP146-201ENST00000410743 123 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC083875.1-201ENST00000419509 405 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms