Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DQA1Q5Y7H0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1Q5Y7H0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DQA1Q5Y7H0 SMG1P4-204ENST00000523028 4131 ntBASIC4.95□□□□□ -1.62
HLA-DQA1Q5Y7H0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DQA1Q5Y7H0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 SMG1P7-201ENST00000565246 2704 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 HSPE1P11-201ENST00000339579 310 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU6-552P-201ENST00000362869 119 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU6-254P-201ENST00000363377 107 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 U3.11-201ENST00000364476 212 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU6-522P-201ENST00000364497 107 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 Y_RNA.301-201ENST00000364990 103 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 SNORD116-29-201ENST00000384516 83 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL606923.1-201ENST00000406616 190 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 MIR1286-201ENST00000408112 78 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RN7SKP229-201ENST00000410465 302 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU4-14P-201ENST00000410858 122 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RPL6P29-201ENST00000414863 865 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 MTCO2P27-201ENST00000420740 428 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC093655.2-201ENST00000425735 631 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC092013.1-201ENST00000438795 332 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC127537.2-201ENST00000439258 465 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 Y_RNA.639-201ENST00000458981 102 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 KLHL2P1-201ENST00000508691 521 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC005741.1-201ENST00000511094 432 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU6-1038P-201ENST00000516516 104 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 Y_RNA.718-201ENST00000517110 102 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 MYL12AP1-201ENST00000518490 515 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 HMGB1P41-201ENST00000520234 440 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 IGLV2-28-201ENST00000520681 304 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC100784.1-201ENST00000522790 310 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC011979.2-201ENST00000527568 352 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC092470.1-201ENST00000546187 132 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC126177.5-201ENST00000549599 178 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC025588.3-201ENST00000604182 274 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL627309.6-201ENST00000606857 840 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL512329.2-201ENST00000607350 548 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL359757.2-201ENST00000624309 274 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 CYP4F35P-202ENST00000636121 390 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DQA1Q5Y7H0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC244517.1-201ENST00000606030 2086 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC007342.5-201ENST00000571340 2142 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL138713.1-201ENST00000624026 2130 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RPL5P18-201ENST00000406671 891 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU2-21P-201ENST00000410368 188 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU2-15P-201ENST00000410692 191 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU6-1304P-201ENST00000411374 106 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 CHIAP3-201ENST00000423668 1133 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RPL7L1P10-201ENST00000427790 463 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 Z82205.1-201ENST00000428456 297 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 NPM1P18-201ENST00000434232 732 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AL161722.2-201ENST00000434731 981 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC105402.2-201ENST00000438503 358 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 HMGB3P11-201ENST00000440127 604 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RNU7-182P-201ENST00000459009 62 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 Y_RNA.631-201ENST00000459607 101 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC130509.1-201ENST00000464158 433 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 AC022034.3-201ENST00000471393 478 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RPS4XP1-201ENST00000482189 787 ntBASIC4.93□□□□□ -1.62
HLA-DQA1Q5Y7H0 RN7SL30P-201ENST00000488416 306 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms