Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNU7-170P-201ENST00000459303 61 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 KCTD9P5-201ENST00000504141 1170 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 MIR4498-201ENST00000577599 66 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AC009487.4-201ENST00000624969 3585 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AC004987.3-201ENST00000413879 771 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 RPL31P45-201ENST00000419532 356 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 OR9N1P-201ENST00000491296 333 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 MTND4P2-201ENST00000507767 1203 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AC108471.1-201ENST00000513977 287 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 AL133271.1-201ENST00000538229 291 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 HPRT1P3-201ENST00000539521 576 ntBASIC3.3□□□□□ -1.88
NUP188Q5SRE5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 GTF2H2B-203ENST00000508065 1432 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 AC138915.3-201ENST00000562908 1389 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 AC007064.1-201ENST00000412238 351 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 AC124916.1-201ENST00000444020 547 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP188Q5SRE5 MIR3605-201ENST00000583214 100 ntBASIC3.29□□□□□ -1.88
NUP188Q5SRE5 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 Y_RNA.796-201ENST00000364268 102 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 Y_RNA.799-201ENST00000364992 102 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AL590399.6-201ENST00000446396 307 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 MRPL50P4-201ENST00000446432 475 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AC016687.1-201ENST00000482574 353 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 RPL9P6-201ENST00000492764 598 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AC009318.2-201ENST00000610917 651 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 AP006248.2-201ENST00000623309 592 ntBASIC3.28□□□□□ -1.88
NUP188Q5SRE5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
NUP188Q5SRE5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AL359511.1-201ENST00000402970 211 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 RPL23AP74-201ENST00000437246 471 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC004825.2-201ENST00000616634 455 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 RN7SKP44-201ENST00000363602 316 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 Y_RNA.269-201ENST00000364685 89 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 RNU1-73P-201ENST00000383971 164 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AL590004.2-201ENST00000404787 371 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 RPLP0P7-201ENST00000416050 667 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AL009174.1-201ENST00000426577 416 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AP000926.3-201ENST00000497201 299 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC055876.1-202ENST00000567053 138 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 AC010928.3-201ENST00000587712 541 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 MIR8070-201ENST00000616510 88 ntBASIC3.27□□□□□ -1.89
NUP188Q5SRE5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NUP188Q5SRE5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AC080125.1-201ENST00000414888 684 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 BTG3P1-201ENST00000435859 716 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AL592437.1-201ENST00000443781 492 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.26□□□□□ -1.89
NUP188Q5SRE5 RPL7P52-201ENST00000449200 742 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 RN7SKP24-201ENST00000515888 284 ntBASIC3.26□□□□□ -1.89
NUP188Q5SRE5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms