Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 OFD1P3Y-201ENST00000453312 783 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 DNAJC19P1-201ENST00000455312 319 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 U3.44-201ENST00000458938 192 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 OR9M1P-201ENST00000459641 921 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC092757.1-201ENST00000467293 467 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 RPS23P3-201ENST00000470993 430 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 KLHL2P1-201ENST00000508691 521 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC105914.1-201ENST00000511798 226 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC026412.2-201ENST00000512270 1075 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 MTCO2P15-201ENST00000532655 656 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 PSMB7P1-201ENST00000556349 514 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC025627.2-201ENST00000576220 160 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC007349.4-201ENST00000608114 532 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC092106.3-201ENST00000611308 722 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AL390240.1-201ENST00000612950 384 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC069209.1-201ENST00000619282 651 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC109809.1-201ENST00000619665 545 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC095031.1-201ENST00000623685 672 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AC091905.1-201ENST00000624400 311 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 ZNF876P-202ENST00000398732 1485 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 AP002001.2-201ENST00000529025 1469 ntBASIC3.28□□□□□ -1.88
ANKRD55Q3KP44 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 MIR506-201ENST00000384998 124 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 ARF4P3-201ENST00000397387 509 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 CYCSP45-201ENST00000402289 315 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 HLFP1-201ENST00000402375 499 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RAB28P1-201ENST00000411517 641 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 OR1AA1P-201ENST00000419597 916 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 USP9YP11-201ENST00000427537 717 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC016712.1-201ENST00000431088 378 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 CBX1P1-201ENST00000440184 427 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RPL12P26-201ENST00000452430 487 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RPL21P134-201ENST00000453468 483 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RPL23AP31-201ENST00000456160 467 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RNA5SP246-201ENST00000458909 119 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 HMGB1P25-201ENST00000468402 607 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RPL35P6-201ENST00000490024 372 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 SETP14-201ENST00000497538 873 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC096751.1-202ENST00000502691 1067 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 HMGB1P28-201ENST00000507778 552 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 SNRPGP16-201ENST00000533275 226 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 HIGD1AP17-201ENST00000554576 276 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AL121576.1-201ENST00000556055 276 ntBASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.27□□□□□ -1.89
ANKRD55Q3KP44 LARP7P2-201ENST00000575306 125 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms