Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RN7SKP128-201ENST00000364270 303 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RNA5SP219-201ENST00000390940 113 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AL139095.3-201ENST00000419672 1203 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC092651.1-201ENST00000426110 312 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 FCF1P4-201ENST00000448326 183 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 OR2AQ1P-201ENST00000451972 200 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 BX510359.5-201ENST00000515651 304 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 SNORA31.18-201ENST00000517043 134 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 MTND5P41-201ENST00000517498 206 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC024405.2-202ENST00000532731 184 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC009120.3-201ENST00000563335 499 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AC133644.2-201ENST00000608142 540 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 uc_338.9-201ENST00000617424 182 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 SNORA43.1-201ENST00000364863 140 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 Y_RNA.352-201ENST00000365439 102 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RNU6-44P-201ENST00000384045 107 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 SNORA51.11-201ENST00000384442 131 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AL031679.1-201ENST00000400616 525 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RNU6-1203P-201ENST00000410703 110 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RN7SKP216-201ENST00000411050 312 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 Y_RNA.625-201ENST00000411256 107 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 CFL1P1-202ENST00000432948 411 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AL590399.4-201ENST00000436561 601 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RPL23AP43-201ENST00000446445 471 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RPL21P71-201ENST00000465598 459 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC098869.1-201ENST00000481627 292 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RN7SL184P-201ENST00000488308 297 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC093852.1-201ENST00000503587 266 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 TBCAP3-201ENST00000512475 312 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 PMS2P3-207ENST00000529061 717 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 NPM1P42-201ENST00000560329 862 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC024255.1-201ENST00000614376 102 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC103705.1-201ENST00000619013 241 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 AC011155.2-201ENST00000623202 216 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 CU639417.4-201ENST00000623928 207 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 U6.114-201ENST00000636407 96 ntBASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTC1Q2NKJ3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 AL391987.6-201ENST00000305671 199 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 RNU6-858P-201ENST00000362436 107 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 RN7SKP124-201ENST00000364730 341 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 Y_RNA.304-201ENST00000365011 112 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 GNG5P2-201ENST00000372054 207 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 HMGB1P20-201ENST00000402555 677 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 AC016739.1-201ENST00000405359 345 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 OR2AT2P-201ENST00000413438 905 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 AC233981.1-201ENST00000423224 461 ntBASIC6.37□□□□□ -1.39
CTC1Q2NKJ3 AL662874.1-201ENST00000426065 230 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms