Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC023509.5-201ENST00000617434 807 ntBASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 TCL6_3.1-201ENST00000619064 137 ntBASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 INTS6P1-201ENST00000504674 2530 ntBASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 AL034546.1-201ENST00000623740 3693 ntBASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
RSPO4Q2I0M5 AC005725.1-201ENST00000577346 2607 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 HSPE1P11-201ENST00000339579 310 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 Y_RNA.126-201ENST00000363382 111 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 RNU6-853P-201ENST00000364306 107 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 RNU6-744P-201ENST00000365557 107 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 RNU6-1029P-201ENST00000384109 107 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 RNA5SP87-201ENST00000384155 118 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 RNU6-1316P-201ENST00000384242 108 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 Y_RNA.793-201ENST00000411222 111 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC007568.1-201ENST00000422912 471 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 MRPS18CP6-201ENST00000423587 223 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 NDUFB1P2-201ENST00000449477 176 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC004801.2-202ENST00000463559 283 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 RN7SL604P-201ENST00000492589 296 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AL035404.1-201ENST00000497982 568 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 Y_RNA.683-201ENST00000516508 93 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 SCARNA16.2-201ENST00000516520 172 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC078899.1-201ENST00000521432 1185 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC135001.1-201ENST00000544546 283 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC128657.1-201ENST00000549459 145 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC018552.3-201ENST00000567416 561 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 MIR5583-1-201ENST00000580941 59 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC092747.3-201ENST00000603769 301 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC010900.2-201ENST00000604508 210 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AP001485.1-201ENST00000604799 199 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AL627230.1-201ENST00000613077 211 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AL138960.1-201ENST00000613838 513 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AC090607.5-201ENST00000615692 224 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 AL442639.1-201ENST00000625030 1899 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 CCT8P1-201ENST00000413611 1657 ntBASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RSPO4Q2I0M5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO4Q2I0M5 MTCO1P24-201ENST00000515438 1558 ntBASIC5.46□□□□□ -1.53
RSPO4Q2I0M5 AL121768.1-201ENST00000613917 2544 ntBASIC5.46□□□□□ -1.53
RSPO4Q2I0M5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO4Q2I0M5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO4Q2I0M5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
RSPO4Q2I0M5 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RSPO4Q2I0M5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms